Literature DB >> 16564019

Kinetic analysis of a high-affinity antibody/antigen interaction performed by multiple Biacore users.

Phinikoula S Katsamba1, Iva Navratilova, Maria Calderon-Cacia, Linsey Fan, Kevin Thornton, Mingde Zhu, Tim Vanden Bos, Carla Forte, Della Friend, Ite Laird-Offringa, Gisele Tavares, John Whatley, Ergang Shi, Angela Widom, Kevin C Lindquist, Scott Klakamp, Andrew Drake, David Bohmann, Marina Roell, Larry Rose, Jill Dorocke, Bruce Roth, Béatrice Luginbühl, David G Myszka.   

Abstract

To explore the reliability of Biacore-based assays, 22 study participants measured the binding of prostate-specific antigen (PSA) to a monoclonal antibody (mAb). Each participant was provided with the same reagents and a detailed experimental protocol. The mAb was immobilized on the sensor chip at three different densities and a two-step assay was used to determine the kinetic and affinity parameters of the PSA/mAb complex. First, PSA was tested over a concentration range of 2.5-600 nM to obtain k(a) information. Second, to define the k(d) of this stable antigen/antibody complex accurately, the highest PSA concentration was retested with the dissociation phase of each binding cycle monitored for 1h. All participants collected data that could be analyzed to obtain kinetic parameters for the interaction. The association and the extended-dissociation data derived from the three antibody surfaces were globally fit using a simple 1:1 interaction model. The average k(a) and k(d) for the PSA/mAb interaction as calculated from the 22 analyses were (4.1+/-0.6) x 10(4) M(-1) s(-1) and (4.5+/-0.6) x 10(-5) s(-1), respectively. Overall, the experimental standard errors in the rate constants were only approximately 14%. Based on the kinetic rate constants, the affinity (K(D)) of the PSA/mAb interaction was 1.1+/-0.2 nM.

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Year:  2006        PMID: 16564019     DOI: 10.1016/j.ab.2006.01.034

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


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