Literature DB >> 16556936

Assembly of AUF1 with eIF4G-poly(A) binding protein complex suggests a translation function in AU-rich mRNA decay.

Jin-Yu Lu1, Naomi Bergman, Navid Sadri, Robert J Schneider.   

Abstract

An AU-rich element (ARE) located in the 3'-untranslated region of many short-lived mRNAs functions as an instability determinant for these transcripts. AUF1/hnRNP D, an ARE-binding protein family consisting of four isoforms, promotes rapid decay of ARE-mRNAs. The mechanism by which AUF1 promotes rapid decay of ARE-mRNA is unclear. AUF1 has been shown to form an RNase-resistant complex in cells with the cap-initiation complex and heat shock proteins Hsp70 and Hsc70, as well as other unidentified factors. To understand the function of the AUF1 complex, we have biochemically investigated the association of AUF1 with the components of the translation initiation complex. We used purified recombinant proteins and a synthetic ARE RNA oligonucleotide to determine the hierarchy of protein interactions in vitro and the effect of AUF1 binding to the ARE on the formation of protein complexes. We demonstrate that all four AUF1 protein isoforms bind directly and strongly to initiation factor eIF4G at a C-terminal site regardless of AUF1 interaction with the ARE. AUF1 is shown to directly interact with poly(A) binding protein (PABP), both independently of eIF4G and in a complex with eIF4G. AUF1-PABP interaction is opposed by AUF1 binding to the ARE or Hsp70 heat shock protein. In vivo, AUF1 interaction with PABP does not alter PABP stability. Based on these and other data, we propose a model for the molecular interactions of AUF1 that involves translation-dependent displacement of AUF1-PABP complexes from ARE-mRNAs with possible unmasking of the poly(A) tail.

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Year:  2006        PMID: 16556936      PMCID: PMC1440908          DOI: 10.1261/rna.2308106

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  63 in total

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Journal:  Genes Dev       Date:  1991-02       Impact factor: 11.361

2.  Selective degradation of AU-rich mRNAs promoted by the p37 AUF1 protein isoform.

Authors:  Bedabrata Sarkar; Qiaoran Xi; Cheng He; Robert J Schneider
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

3.  The c-fos transcript is targeted for rapid decay by two distinct mRNA degradation pathways.

Authors:  A B Shyu; M E Greenberg; J G Belasco
Journal:  Genes Dev       Date:  1989-01       Impact factor: 11.361

4.  A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation.

Authors:  G Shaw; R Kamen
Journal:  Cell       Date:  1986-08-29       Impact factor: 41.582

5.  Removal of poly(A) and consequent degradation of c-fos mRNA facilitated by 3' AU-rich sequences.

Authors:  T Wilson; R Treisman
Journal:  Nature       Date:  1988-11-24       Impact factor: 49.962

6.  Multiple elements in the c-fos protein-coding region facilitate mRNA deadenylation and decay by a mechanism coupled to translation.

Authors:  S C Schiavi; C L Wellington; A B Shyu; C Y Chen; M E Greenberg; J G Belasco
Journal:  J Biol Chem       Date:  1994-02-04       Impact factor: 5.157

7.  Lactate dehydrogenase is an AU-rich element-binding protein that directly interacts with AUF1.

Authors:  Patricia A Pioli; B JoNell Hamilton; John E Connolly; Gary Brewer; William F C Rigby
Journal:  J Biol Chem       Date:  2002-07-09       Impact factor: 5.157

8.  An A + U-rich element RNA-binding factor regulates c-myc mRNA stability in vitro.

Authors:  G Brewer
Journal:  Mol Cell Biol       Date:  1991-05       Impact factor: 4.272

9.  Immunopurification of heterogeneous nuclear ribonucleoprotein particles reveals an assortment of RNA-binding proteins.

Authors:  S Piñol-Roma; Y D Choi; M J Matunis; G Dreyfuss
Journal:  Genes Dev       Date:  1988-02       Impact factor: 11.361

10.  Poly(A) shortening and degradation of the 3' A+U-rich sequences of human c-myc mRNA in a cell-free system.

Authors:  G Brewer; J Ross
Journal:  Mol Cell Biol       Date:  1988-04       Impact factor: 4.272

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  40 in total

1.  PAR-CLIP analysis uncovers AUF1 impact on target RNA fate and genome integrity.

Authors:  Je-Hyun Yoon; Supriyo De; Subramanya Srikantan; Kotb Abdelmohsen; Ioannis Grammatikakis; Jiyoung Kim; Kyoung Mi Kim; Ji Heon Noh; Elizabeth J F White; Jennifer L Martindale; Xiaoling Yang; Min-Ju Kang; William H Wood; Nicole Noren Hooten; Michele K Evans; Kevin G Becker; Vidisha Tripathi; Kannanganattu V Prasanth; Gerald M Wilson; Thomas Tuschl; Nicholas T Ingolia; Markus Hafner; Myriam Gorospe
Journal:  Nat Commun       Date:  2014-11-04       Impact factor: 14.919

2.  Direct binding of specific AUF1 isoforms to tandem zinc finger domains of tristetraprolin (TTP) family proteins.

Authors:  Vishram P Kedar; Beth E Zucconi; Gerald M Wilson; Perry J Blackshear
Journal:  J Biol Chem       Date:  2011-12-27       Impact factor: 5.157

3.  Alternatively expressed domains of AU-rich element RNA-binding protein 1 (AUF1) regulate RNA-binding affinity, RNA-induced protein oligomerization, and the local conformation of bound RNA ligands.

Authors:  Beth E Zucconi; Jeff D Ballin; Brandy Y Brewer; Christina R Ross; Jun Huang; Eric A Toth; Gerald M Wilson
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

Review 4.  The role of AUF1 in regulated mRNA decay.

Authors:  Frances M Gratacós; Gary Brewer
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Nov-Dec       Impact factor: 9.957

5.  Translation control of trpG from transcripts originating from the folate operon promoter of Bacillus subtilis is influenced by translation-mediated displacement of bound TRAP, while translation control of transcripts originating from a newly identified trpG promoter is not.

Authors:  Helen Yakhnin; Alexander V Yakhnin; Paul Babitzke
Journal:  J Bacteriol       Date:  2006-11-17       Impact factor: 3.490

6.  Translation initiation mediated by RNA looping.

Authors:  Ki Young Paek; Ka Young Hong; Incheol Ryu; Sung Mi Park; Sun Ju Keum; Oh Sung Kwon; Sung Key Jang
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-12       Impact factor: 11.205

7.  Hsp27 and F-box protein β-TrCP promote degradation of mRNA decay factor AUF1.

Authors:  Mei-Ling Li; Jennifer Defren; Gary Brewer
Journal:  Mol Cell Biol       Date:  2013-03-25       Impact factor: 4.272

8.  Identification of mRNA binding proteins that regulate the stability of LDL receptor mRNA through AU-rich elements.

Authors:  Hai Li; Wei Chen; Yue Zhou; Parveen Abidi; Orr Sharpe; William H Robinson; Fredric B Kraemer; Jingwen Liu
Journal:  J Lipid Res       Date:  2009-01-13       Impact factor: 5.922

Review 9.  AUF1 regulation of coding and noncoding RNA.

Authors:  Elizabeth J F White; Aerielle E Matsangos; Gerald M Wilson
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-09-13       Impact factor: 9.957

Review 10.  Post-transcriptional control of gene expression by AUF1: mechanisms, physiological targets, and regulation.

Authors:  Elizabeth J F White; Gary Brewer; Gerald M Wilson
Journal:  Biochim Biophys Acta       Date:  2012-12-14
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