Literature DB >> 16552138

Structural phase transition of monoclinic crystals of hen egg-white lysozyme.

Kazuaki Harata1, Toshihiko Akiba.   

Abstract

Two monoclinic crystals (space group P2(1)) of hen egg-white lysozyme, a type I crystal grown at room temperature in a D2O solution with pD 4.5 containing 2%(w/v) sodium nitrate and a type II crystal grown at 313 K in a 10%(w/v) sodium chloride solution with pH 7.6, were each transformed into another monoclinic crystal with the same space group by dehydration-induced phase transition. Changes in X-ray diffraction were recorded to monitor the progress of the crystal transformation, which started with the appearance of diffuse streaks. In both crystals, the intensity of h + l odd reflections gradually weakened and finally disappeared on completion of the transformation. X-ray diffraction in the intermediate state indicated the presence of lattices of both the native and transformed crystals. In the native type I crystal, two alternate conformations were observed in the main chain of the region Gly71-Asn74. One conformer bound a sodium ion which was replaced with a water molecule in the other conformer. In the transformed crystal, the sodium ion was removed and the main-chain conformation of this region was converted to that of the water-bound form. The transformed crystal diffracted to a higher resolution than the native crystal, while the peak width of the diffraction spots increased. Analysis of the thermal motion of protein molecules using the TLS model has shown that the enhancement of the diffraction power in the transformed crystal is mainly ascribable to the suppression of rigid-body motion owing to an increase in intermolecular contacts as a result of the loss of bulk solvent.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16552138     DOI: 10.1107/S0907444906001314

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  Molecular dynamics simulation of triclinic lysozyme in a crystal lattice.

Authors:  Pawel A Janowski; Chunmei Liu; Jason Deckman; David A Case
Journal:  Protein Sci       Date:  2015-06-11       Impact factor: 6.725

2.  Effects of protein-crystal hydration and temperature on side-chain conformational heterogeneity in monoclinic lysozyme crystals.

Authors:  Hakan Atakisi; David W Moreau; Robert E Thorne
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-04-03       Impact factor: 7.652

3.  Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism.

Authors:  Michael C Thompson; Duilio Cascio; Todd O Yeates
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-04-24       Impact factor: 7.652

4.  The effect of local dynamics of Atto 390-labeled lysozyme on fluorescence anisotropy modeling.

Authors:  Jeremiah J Babcock; Lorenzo Brancaleon
Journal:  Biopolymers       Date:  2015-05       Impact factor: 2.505

5.  Selection of Protein Crystal Forms Facilitated by Polymer-Induced Heteronucleation.

Authors:  Adam L Grzesiak; Adam J Matzger
Journal:  Cryst Growth Des       Date:  2008       Impact factor: 4.076

Review 6.  Best practices for time-resolved serial synchrotron crystallography.

Authors:  Eike C Schulz; Briony A Yorke; Arwen R Pearson; Pedram Mehrabi
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-01-01       Impact factor: 7.652

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.