Literature DB >> 16547170

Genome-wide analyses identify transcription factors required for proper morphogenesis of Drosophila sensory neuron dendrites.

Jay Z Parrish1, Michael D Kim, Lily Yeh Jan, Yuh Nung Jan.   

Abstract

Dendrite arborization patterns are critical determinants of neuronal function. To explore the basis of transcriptional regulation in dendrite pattern formation, we used RNA interference (RNAi) to screen 730 transcriptional regulators and identified 78 genes involved in patterning the stereotyped dendritic arbors of class I da neurons in Drosophila. Most of these transcriptional regulators affect dendrite morphology without altering the number of class I dendrite arborization (da) neurons and fall primarily into three groups. Group A genes control both primary dendrite extension and lateral branching, hence the overall dendritic field. Nineteen genes within group A act to increase arborization, whereas 20 other genes restrict dendritic coverage. Group B genes appear to balance dendritic outgrowth and branching. Nineteen group B genes function to promote branching rather than outgrowth, and two others have the opposite effects. Finally, 10 group C genes are critical for the routing of the dendritic arbors of individual class I da neurons. Thus, multiple genetic programs operate to calibrate dendritic coverage, to coordinate the elaboration of primary versus secondary branches, and to lay out these dendritic branches in the proper orientation.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16547170      PMCID: PMC1472285          DOI: 10.1101/gad.1391006

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  53 in total

1.  Histone methyltransferase activity of a Drosophila Polycomb group repressor complex.

Authors:  Jürg Müller; Craig M Hart; Nicole J Francis; Marcus L Vargas; Aditya Sengupta; Brigitte Wild; Ellen L Miller; Michael B O'Connor; Robert E Kingston; Jeffrey A Simon
Journal:  Cell       Date:  2002-10-18       Impact factor: 41.582

2.  Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites.

Authors:  Birgit Czermin; Raffaella Melfi; Donna McCabe; Volker Seitz; Axel Imhof; Vincenzo Pirrotta
Journal:  Cell       Date:  2002-10-18       Impact factor: 41.582

3.  Green fluorescent protein tagging Drosophila proteins at their native genomic loci with small P elements.

Authors:  Peter J Clyne; Jennie S Brotman; Sean T Sweeney; Graeme Davis
Journal:  Genetics       Date:  2003-11       Impact factor: 4.562

4.  A CaMKII-NeuroD signaling pathway specifies dendritic morphogenesis.

Authors:  Brice Gaudillière; Yoshiyuki Konishi; Núria de la Iglesia; Gui lan Yao; Azad Bonni
Journal:  Neuron       Date:  2004-01-22       Impact factor: 17.173

5.  Olfactory receptor neuron axon targeting: intrinsic transcriptional control and hierarchical interactions.

Authors:  Takaki Komiyama; John R Carlson; Liqun Luo
Journal:  Nat Neurosci       Date:  2004-07-11       Impact factor: 24.884

6.  A functional genomic screen for cardiogenic genes using RNA interference in developing Drosophila embryos.

Authors:  Yong-Ou Kim; Sang-Joon Park; Robert S Balaban; Marshall Nirenberg; Yongsok Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-18       Impact factor: 11.205

7.  Nervy links protein kinase a to plexin-mediated semaphorin repulsion.

Authors:  Jonathan R Terman; Alex L Kolodkin
Journal:  Science       Date:  2004-02-20       Impact factor: 47.728

8.  The Drosophila Brahma (SWI/SNF) chromatin remodeling complex exhibits cell-type specific activation and repression functions.

Authors:  Daniel R Marenda; Claudia B Zraly; Andrew K Dingwall
Journal:  Dev Biol       Date:  2004-03-15       Impact factor: 3.582

9.  Dendrite development regulated by CREST, a calcium-regulated transcriptional activator.

Authors:  Hiroyuki Aizawa; Shu-Ching Hu; Kathryn Bobb; Karthik Balakrishnan; Gulayse Ince; Inga Gurevich; Mitra Cowan; Anirvan Ghosh
Journal:  Science       Date:  2004-01-09       Impact factor: 47.728

10.  Functional dissection of an innate immune response by a genome-wide RNAi screen.

Authors:  Edan Foley; Patrick H O'Farrell
Journal:  PLoS Biol       Date:  2004-06-22       Impact factor: 8.029

View more
  104 in total

1.  Time-lapse imaging and cell-specific expression profiling reveal dynamic branching and molecular determinants of a multi-dendritic nociceptor in C. elegans.

Authors:  Cody J Smith; Joseph D Watson; W Clay Spencer; Tim O'Brien; Byeong Cha; Adi Albeg; Millet Treinin; David M Miller
Journal:  Dev Biol       Date:  2010-06-09       Impact factor: 3.582

Review 2.  Transcriptional regulation of neuronal phenotype in mammals.

Authors:  Qiufu Ma
Journal:  J Physiol       Date:  2006-07-06       Impact factor: 5.182

3.  MicroRNA-mediated conversion of human fibroblasts to neurons.

Authors:  Andrew S Yoo; Alfred X Sun; Li Li; Aleksandr Shcheglovitov; Thomas Portmann; Yulong Li; Chris Lee-Messer; Ricardo E Dolmetsch; Richard W Tsien; Gerald R Crabtree
Journal:  Nature       Date:  2011-07-13       Impact factor: 49.962

4.  Network activity-independent coordinated gene expression program for synapse assembly.

Authors:  Luis M Valor; Paul Charlesworth; Lawrence Humphreys; Chris N G Anderson; Seth G N Grant
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-05       Impact factor: 11.205

5.  Dual branch-promoting and branch-repelling actions of Slit/Robo signaling on peripheral and central branches of developing sensory axons.

Authors:  Le Ma; Marc Tessier-Lavigne
Journal:  J Neurosci       Date:  2007-06-20       Impact factor: 6.167

6.  The conserved P body component HPat/Pat1 negatively regulates synaptic terminal growth at the larval Drosophila neuromuscular junction.

Authors:  Sarala J Pradhan; Katherine R Nesler; Sarah F Rosen; Yasuko Kato; Akira Nakamura; Mani Ramaswami; Scott A Barbee
Journal:  J Cell Sci       Date:  2012-10-24       Impact factor: 5.285

7.  Coordinate control of terminal dendrite patterning and dynamics by the membrane protein Raw.

Authors:  Jiae Lee; Yun Peng; Wen-Yang Lin; Jay Z Parrish
Journal:  Development       Date:  2014-12-05       Impact factor: 6.868

Review 8.  Age, plasticity, and homeostasis in childhood brain disorders.

Authors:  Maureen Dennis; Brenda J Spiegler; Jenifer J Juranek; Erin D Bigler; O Carter Snead; Jack M Fletcher
Journal:  Neurosci Biobehav Rev       Date:  2013-10-03       Impact factor: 8.989

9.  Spatial and temporal control of gene expression in Drosophila using the inducible GeneSwitch GAL4 system. I. Screen for larval nervous system drivers.

Authors:  Louise Nicholson; Gunisha K Singh; Thomas Osterwalder; Gregg W Roman; Ronald L Davis; Haig Keshishian
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

Review 10.  ATP-dependent chromatin remodeling in neural development.

Authors:  Andrew S Yoo; Gerald R Crabtree
Journal:  Curr Opin Neurobiol       Date:  2009-05-11       Impact factor: 6.627

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.