Literature DB >> 16543945

Binding energies of protonated betaine complexes: a probe of zwitterion structure in the gas phase.

W D Price1, R A Jockusch, E R Williams.   

Abstract

The dissociation kinetics of proton-bound dimers of betaine with molecules of comparable gas-phase basicity were investigated using blackbody infrared radiative dissociation (BIRD). Threshold dissociation energies were obtained from these data using master equation modeling. For bases that have comparable or higher gas-phase basicity, the binding energy of the protonated base.betaine complex is approximately 1.4 eV. For molecules that are approximately 2 kcal/mol or more less basic, the dissociation energy of the complexes is approximately 1.2 eV. The higher binding energy of the former is attributed to an ion-zwitterion structure which has a much larger ion-dipole interaction. The lower binding energy for molecules that are approximately 2 kcal/mol or more less basic indicates that an ion-molecule structure is more favored. Semiempirical calculations at both the AM1 and PM3 levels indicate the most stable ion-molecule structure is one in which the base interacts with the charged quaternary ammonium end of betaine. These results indicate that the measurement of binding energies of neutral molecules to biological ions could provide a useful probe for the presence of zwitterions and salt bridges in the gas phase. From the BIRD data, the gas-phase basicity of betaine obtained from the kinetic method is found to be 239.2 +/- 1.0 kcal/mol. This value is in excellent agreement with the value of 239.3 kcal/mol (298 K) from ab initio calculations at the MP2/6-31+g** level. The measured value is slightly higher than those reported previously. This difference is attributed to entropy effects. The lower ion internal energy and longer time frame of BIRD experiments should provide values closer to those at standard temperature.

Entities:  

Year:  1998        PMID: 16543945      PMCID: PMC1403153          DOI: 10.1021/ja972527q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

1.  Activation of Peptide ions by blackbody radiation: factors that lead to dissociation kinetics in the rapid energy exchange limit.

Authors:  W D Price; E R Williams
Journal:  J Phys Chem A       Date:  1997-11-20       Impact factor: 2.781

2.  Is arginine a zwitterion in the gas phase?

Authors:  W D Price; R A Jockusch; E R Williams
Journal:  J Am Chem Soc       Date:  1997-12-10       Impact factor: 15.419

3.  The effect of ion size on rate of dissociation: RRKM calculations on model large polypeptide ions.

Authors:  L L Griffin; D J McAdoo
Journal:  J Am Soc Mass Spectrom       Date:  1993-01       Impact factor: 3.109

4.  Role of the site of protonation in the low-energy decompositions of gas-phase peptide ions.

Authors:  K A Cox; S J Gaskell; M Morris; A Whiting
Journal:  J Am Soc Mass Spectrom       Date:  1996-06       Impact factor: 3.109

5.  Tandem mass spectrometry of large biomolecule ions by blackbody infrared radiative dissociation.

Authors:  W D Price; P D Schnier; E R Williams
Journal:  Anal Chem       Date:  1996-03-01       Impact factor: 6.986

6.  Binding energies of the proton-bound amino Acid dimers gly.gly, ala.ala, gly.ala, and lys.lys measured by blackbody infrared radiative dissociation.

Authors:  W D Price; P D Schnier; E R Williams
Journal:  J Phys Chem B       Date:  1997-01-23       Impact factor: 2.991

7.  Effects of charge state on fragmentation pathways, dynamics, and activation energies of ubiquitin ions measured by blackbody infrared radiative dissociation.

Authors:  R A Jockusch; P D Schnier; W D Price; E F Strittmatter; P A Demirev; E R Williams
Journal:  Anal Chem       Date:  1997-03-15       Impact factor: 6.986

8.  Dissociation of heme-globin complexes by blackbody infrared radiative dissociation: molecular specificity in the gas phase?

Authors:  D S Gross; Y Zhao; E R Williams
Journal:  J Am Soc Mass Spectrom       Date:  1997-05       Impact factor: 3.109

9.  Effect of the position of a basic amino acid on C-terminal rearrangement of protonated peptides upon collision-induced dissociation.

Authors:  J Gonzalez; V Besada; H Garay; O Reyes; G Padron; Y Tambara; T Takao; Y Shimonishi
Journal:  J Mass Spectrom       Date:  1996-02       Impact factor: 1.982

10.  Blackbody infrared radiative dissociation of bradykinin and its analogues: energetics, dynamics, and evidence for salt-bridge structures in the gas phase.

Authors:  P D Schnier; W D Price; R A Jockusch; E R Williams
Journal:  J Am Chem Soc       Date:  1996-07-31       Impact factor: 15.419

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  13 in total

1.  Gas phase H/D exchange kinetics: DI versus D2O.

Authors:  T G Schaaff; J L Stephenson; S A McLuckey
Journal:  J Am Soc Mass Spectrom       Date:  2000-02       Impact factor: 3.109

2.  Evaluation of ion mobility spectroscopy for determining charge-solvated versus salt-bridge structures of protonated trimers.

Authors:  Richard L Wong; Evan R Williams; Anne E Counterman; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2005-07       Impact factor: 3.109

3.  Gas-phase basicity of (CH3)3N+-C6H4-COO- zwitterions: a new class of organic super bases.

Authors:  E F Strittmatter; R L Wong; E R Williams
Journal:  J Am Chem Soc       Date:  2000-02-16       Impact factor: 15.419

4.  Fragmentation of doubly-protonated peptide ion populations labeled by H/D exchange with CD(3)OD.

Authors:  Kristin A Herrmann; Krishna Kuppannan; Vicki H Wysocki
Journal:  Int J Mass Spectrom       Date:  2006       Impact factor: 1.986

5.  Role of Lys-12 in catalysis by triosephosphate isomerase: a two-part substrate approach.

Authors:  Maybelle K Go; Astrid Koudelka; Tina L Amyes; John P Richard
Journal:  Biochemistry       Date:  2010-06-29       Impact factor: 3.162

6.  Rapid Determination of Activation Energies for Gas-Phase Protein Unfolding and Dissociation in a Q-IM-ToF Mass Spectrometer.

Authors:  Micah T Donor; Samantha O Shepherd; James S Prell
Journal:  J Am Soc Mass Spectrom       Date:  2020-02-20       Impact factor: 3.109

7.  Determination of the activation energy for unimolecular dissociation of a non-covalent gas-phase peptide: substrate complex by infrared multiphoton dissociation fourier transform ion cyclotron resonance mass spectrometry.

Authors:  Mathias Schäfer; Carsten Schmuck; Martin Heil; Helen J Cooper; Christopher L Hendrickson; Michael J Chalmers; Alan G Marshall
Journal:  J Am Soc Mass Spectrom       Date:  2003-11       Impact factor: 3.109

8.  Glycine enolates: the effect of formation of iminium ions to simple ketones on alpha-amino carbon acidity and a comparison with pyridoxal iminium ions.

Authors:  Juan Crugeiras; Ana Rios; Enrique Riveiros; Tina L Amyes; John P Richard
Journal:  J Am Chem Soc       Date:  2008-01-17       Impact factor: 15.419

9.  Effects of Gas-Phase Basicity on the Proton Transfer between Organic Bases and Trifluoroacetic Acid in the Gas Phase: Energetics of Charge Solvation and Salt Bridges.

Authors:  E F Strittmatter; R L Wong; E R Williams
Journal:  J Phys Chem A       Date:  2000-11-16       Impact factor: 2.781

10.  Unimolecular reactions of dihydrated alkaline earth metal dications M2+(H2O)2, M = Be, Mg, Ca, Sr, and Ba: salt-bridge mechanism in the proton-transfer reaction M2+(H2O)2 --> MOH+ + H3O.

Authors:  M Beyer; E R Williams; V E Bondybey
Journal:  J Am Chem Soc       Date:  1999-02-24       Impact factor: 15.419

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