Literature DB >> 16541080

Structural basis for the spectral difference in luciferase bioluminescence.

Toru Nakatsu1, Susumu Ichiyama, Jun Hiratake, Adrian Saldanha, Nobuyuki Kobashi, Kanzo Sakata, Hiroaki Kato.   

Abstract

Fireflies communicate with each other by emitting yellow-green to yellow-orange brilliant light. The bioluminescence reaction, which uses luciferin, Mg-ATP and molecular oxygen to yield an electronically excited oxyluciferin species, is carried out by the enzyme luciferase. Visible light is emitted during relaxation of excited oxyluciferin to its ground state. The high quantum yield of the luciferin/luciferase reaction and the change in bioluminescence colour caused by subtle structural differences in luciferase have attracted much research interest. In fact, a single amino acid substitution in luciferase changes the emission colour from yellow-green to red. Although the crystal structure of luciferase from the North American firefly (Photinus pyralis) has been described, the detailed mechanism for the bioluminescence colour change is still unclear. Here we report the crystal structures of wild-type and red mutant (S286N) luciferases from the Japanese Genji-botaru (Luciola cruciata) in complex with a high-energy intermediate analogue, 5'-O-[N-(dehydroluciferyl)-sulfamoyl]adenosine (DLSA). Comparing these structures to those of the wild-type luciferase complexed with AMP plus oxyluciferin (products) reveals a significant conformational change in the wild-type enzyme but not in the red mutant. This conformational change involves movement of the hydrophobic side chain of Ile 288 towards the benzothiazole ring of DLSA. Our results indicate that the degree of molecular rigidity of the excited state of oxyluciferin, which is controlled by a transient movement of Ile 288, determines the colour of bioluminescence during the emission reaction.

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Year:  2006        PMID: 16541080     DOI: 10.1038/nature04542

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  106 in total

1.  Design and Synthesis of an Alkynyl Luciferin Analogue for Bioluminescence Imaging.

Authors:  Rachel C Steinhardt; Jessica M O'Neill; Colin M Rathbun; David C McCutcheon; Miranda A Paley; Jennifer A Prescher
Journal:  Chemistry       Date:  2016-01-19       Impact factor: 5.236

Review 2.  Molecular enigma of multicolor bioluminescence of firefly luciferase.

Authors:  Saman Hosseinkhani
Journal:  Cell Mol Life Sci       Date:  2010-12-28       Impact factor: 9.261

3.  Crystal structures of the luciferase and green fluorescent protein from Renilla reniformis.

Authors:  Andreas Markus Loening; Timothy David Fenn; Sanjiv Sam Gambhir
Journal:  J Mol Biol       Date:  2007-10-03       Impact factor: 5.469

4.  Exploiting ligand conformation in selective inhibition of non-ribosomal peptide synthetase amino acid adenylation with designed macrocyclic small molecules.

Authors:  Justin S Cisar; Julian A Ferreras; Rajesh K Soni; Luis E N Quadri; Derek S Tan
Journal:  J Am Chem Soc       Date:  2007-06-02       Impact factor: 15.419

5.  Dynamics of firefly luciferase inhibition by general anesthetics: Gaussian and anisotropic network analyses.

Authors:  Agnieszka Szarecka; Yan Xu; Pei Tang
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

6.  An investigation of the reaction kinetics of luciferase and the effect of ionizing radiation on the reaction rate.

Authors:  Nikolas Berovic; David J Parker; Michael D Smith
Journal:  Eur Biophys J       Date:  2008-12-18       Impact factor: 1.733

7.  Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7.

Authors:  Gerrit Langer; Serge X Cohen; Victor S Lamzin; Anastassis Perrakis
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

Review 8.  Chemical approaches to detect and analyze protein sulfenic acids.

Authors:  Cristina M Furdui; Leslie B Poole
Journal:  Mass Spectrom Rev       Date:  2013-09-17       Impact factor: 10.946

9.  Design, synthesis, and biological evaluation of α-hydroxyacyl-AMS inhibitors of amino acid adenylation enzymes.

Authors:  Tony D Davis; Poornima Mohandas; Maria I Chiriac; Glennon V Bythrow; Luis E N Quadri; Derek S Tan
Journal:  Bioorg Med Chem Lett       Date:  2016-09-16       Impact factor: 2.823

10.  Global conformational change associated with the two-step reaction catalyzed by Escherichia coli lipoate-protein ligase A.

Authors:  Kazuko Fujiwara; Nobuo Maita; Harumi Hosaka; Kazuko Okamura-Ikeda; Atsushi Nakagawa; Hisaaki Taniguchi
Journal:  J Biol Chem       Date:  2010-01-19       Impact factor: 5.157

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