Literature DB >> 16540691

Functional links between the Prp19-associated complex, U4/U6 biogenesis, and spliceosome recycling.

Chun-Hong Chen1, Der-I Kao, Shih-Peng Chan, Tsu-Chung Kao, Jui-Yen Lin, Soo-Chen Cheng.   

Abstract

The Prp19-associated complex, consisting of at least eight protein components, is involved in spliceosome activation by specifying the interaction of U5 and U6 with pre-mRNA for their stable association with the spliceosome after U4 dissociation. We show here that yeast cells depleted of one or two of the Prp19-associated components, accumulate the free form of U4. In NTC25-deleted cells, the level of U6 was also reduced. Extracts prepared from NTC25-deleted cells contained neither free U4 nor U6 and were ineffective in spliceosome recycling in the in vitro splicing reaction. Overexpression of U6 partially rescued the temperature-sensitive growth defect and decreased the relative amount of free U4 in NTC25-deleted cells, indicating that the accumulation of free U4 was a consequence of insufficient amounts of U6 snRNA. Extracts prepared from U6-overproducing NTC25-deleted cells containing free-form U6 were capable of spliceosome recycling, suggesting a role of free U6 RNP in spliceosome recycling. Our results demonstrate that in addition to direct participation in spliceosome activation, the Prp19-associated complex has an indirect role in spliceosome recycling through affecting the biogenesis of U4/U6 snRNP in the in vivo splicing reaction.

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Year:  2006        PMID: 16540691      PMCID: PMC1440898          DOI: 10.1261/rna.2292106

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  43 in total

1.  Specific alterations of U1-C protein or U1 small nuclear RNA can eliminate the requirement of Prp28p, an essential DEAD box splicing factor.

Authors:  J Y Chen; L Stands; J P Staley; R R Jackups; L J Latus; T H Chang
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

2.  Composition and functional characterization of the yeast spliceosomal penta-snRNP.

Authors:  Scott W Stevens; Daniel E Ryan; Helen Y Ge; Roger E Moore; Mary K Young; Terry D Lee; John Abelson
Journal:  Mol Cell       Date:  2002-01       Impact factor: 17.970

3.  Functional and physical interactions between components of the Prp19p-associated complex.

Authors:  Chun-Hong Chen; Wan-Chin Yu; Twee Y Tsao; Lian-Yung Wang; Hau-Ren Chen; Jui-Yen Lin; Wei-Yü Tsai; Soo-Chen Cheng
Journal:  Nucleic Acids Res       Date:  2002-02-15       Impact factor: 16.971

4.  The 65 and 110 kDa SR-related proteins of the U4/U6.U5 tri-snRNP are essential for the assembly of mature spliceosomes.

Authors:  O V Makarova; E M Makarov; R Lührmann
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

5.  Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.

Authors:  Melissa S Jurica; Lawrence J Licklider; Steven R Gygi; Nikolaus Grigorieff; Melissa J Moore
Journal:  RNA       Date:  2002-04       Impact factor: 4.942

6.  Comprehensive proteomic analysis of the human spliceosome.

Authors:  Zhaolan Zhou; Lawrence J Licklider; Steven P Gygi; Robin Reed
Journal:  Nature       Date:  2002-09-12       Impact factor: 49.962

7.  The Prp19-associated complex is required for specifying interactions of U5 and U6 with pre-mRNA during spliceosome activation.

Authors:  Shih-Peng Chan; Soo-Chen Cheng
Journal:  J Biol Chem       Date:  2005-06-30       Impact factor: 5.157

8.  A Sm-like protein complex that participates in mRNA degradation.

Authors:  E Bouveret; G Rigaut; A Shevchenko; M Wilm; B Séraphin
Journal:  EMBO J       Date:  2000-04-03       Impact factor: 11.598

9.  Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs.

Authors:  Melanie D Ohi; Andrew J Link; Liping Ren; Jennifer L Jennings; W Hayes McDonald; Kathleen L Gould
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

10.  p110, a novel human U6 snRNP protein and U4/U6 snRNP recycling factor.

Authors:  Mathias Bell; Silke Schreiner; Andrey Damianov; Ram Reddy; Albrecht Bindereif
Journal:  EMBO J       Date:  2002-06-03       Impact factor: 11.598

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  17 in total

1.  The Prp19 complex and the Usp4Sart3 deubiquitinating enzyme control reversible ubiquitination at the spliceosome.

Authors:  Eun Joo Song; Shannon L Werner; Jakob Neubauer; Frank Stegmeier; Julie Aspden; Donald Rio; J Wade Harper; Stephen J Elledge; Marc W Kirschner; Michael Rape
Journal:  Genes Dev       Date:  2010-07-01       Impact factor: 11.361

2.  A novel splicing factor, Yju2, is associated with NTC and acts after Prp2 in promoting the first catalytic reaction of pre-mRNA splicing.

Authors:  Yen-Chi Liu; Hsin-Chou Chen; Nan-Ying Wu; Soo-Chen Cheng
Journal:  Mol Cell Biol       Date:  2007-05-21       Impact factor: 4.272

3.  Sad1 counteracts Brr2-mediated dissociation of U4/U6.U5 in tri-snRNP homeostasis.

Authors:  Yu-Hsin Huang; Che-Sheng Chung; Der-I Kao; Tzu-Chung Kao; Soo-Chen Cheng
Journal:  Mol Cell Biol       Date:  2013-11-04       Impact factor: 4.272

4.  Spliceosomal small nuclear ribonucleoprotein particles repeatedly cycle through Cajal bodies.

Authors:  David Stanek; Jarmila Pridalová-Hnilicová; Ivan Novotný; Martina Huranová; Michaela Blazíková; Xin Wen; Aparna K Sapra; Karla M Neugebauer
Journal:  Mol Biol Cell       Date:  2008-03-26       Impact factor: 4.138

5.  Ntc90 is required for recruiting first step factor Yju2 but not for spliceosome activation.

Authors:  Kae-Jiun Chang; Hsin-Chou Chen; Soo-Chen Cheng
Journal:  RNA       Date:  2009-07-17       Impact factor: 4.942

6.  Decoding ubiquitin for mitosis.

Authors:  Sadek Fournane; Ksenia Krupina; Charlotte Kleiss; Izabela Sumara
Journal:  Genes Cancer       Date:  2012-11

7.  The PSO4 protein complex associates with replication protein A (RPA) and modulates the activation of ataxia telangiectasia-mutated and Rad3-related (ATR).

Authors:  Li Wan; Jun Huang
Journal:  J Biol Chem       Date:  2014-01-17       Impact factor: 5.157

8.  PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.

Authors:  Ju-Mei Li; Xiao Ye Ji; Alexandre Maréchal; Ching-Shyi Wu; Stephanie A Yazinski; Hai Dang Nguyen; Shizhou Liu; Amanda E Jiménez; Jianping Jin; Lee Zou
Journal:  Mol Cell       Date:  2013-12-12       Impact factor: 17.970

9.  Structural basis for dual roles of Aar2p in U5 snRNP assembly.

Authors:  Gert Weber; Vanessa F Cristão; Karine F Santos; Sina Mozaffari Jovin; Anna C Heroven; Nicole Holton; Reinhard Lührmann; Jean D Beggs; Markus C Wahl
Journal:  Genes Dev       Date:  2013-02-26       Impact factor: 11.361

10.  The RNA binding protein Cwc2 interacts directly with the U6 snRNA to link the nineteen complex to the spliceosome during pre-mRNA splicing.

Authors:  Joanne C McGrail; André Krause; Raymond T O'Keefe
Journal:  Nucleic Acids Res       Date:  2009-05-12       Impact factor: 16.971

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