Literature DB >> 16535220

Critical evaluation of membrane supports for use in quantitative hybridizations.

L Raskin, W C Capman, M D Kane, B E Rittmann, D A Stahl.   

Abstract

The quantification of 16S rRNA by oligonucleotide probe hybridization was investigated with MagnaGraph (Micron Separation, Inc. [MSI]), Magna Charge (MSI), Magna (MSI), Immobilon-N (Millipore Corporation), and Nytran (Schleicher & Schuell, Inc.) membranes as supports for nucleic acid immobilization. The levels of detectability provided by the Magna Charge and Immobilon-N membranes were 20 to 50 times better than those obtained with the MagnaGraph, Magna, and Nytran membranes. The variability of the signal response for individual membranes ranged from 10 to 50%, with the Magna Charge and Immobilon-N membranes demonstrating the lowest variability.

Entities:  

Year:  1996        PMID: 16535220      PMCID: PMC1388761          DOI: 10.1128/aem.62.1.300-303.1996

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  4 in total

1.  Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens.

Authors:  L Raskin; J M Stromley; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1994-04       Impact factor: 4.792

2.  Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization.

Authors:  L Raskin; L K Poulsen; D R Noguera; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1994-04       Impact factor: 4.792

Review 3.  Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.

Authors:  R R Gutell; N Larsen; C R Woese
Journal:  Microbiol Rev       Date:  1994-03

4.  Use of phylogenetically based hybridization probes for studies of ruminal microbial ecology.

Authors:  D A Stahl; B Flesher; H R Mansfield; L Montgomery
Journal:  Appl Environ Microbiol       Date:  1988-05       Impact factor: 4.792

  4 in total
  4 in total

1.  The presence of humic substances and DNA in RNA extracts affects hybridization results.

Authors:  E W Alm; D Zheng; L Raskin
Journal:  Appl Environ Microbiol       Date:  2000-10       Impact factor: 4.792

2.  Molecular evidence for novel planctomycete diversity in a municipal wastewater treatment plant.

Authors:  Rakia Chouari; Denis Le Paslier; Patrick Daegelen; Philippe Ginestet; Jean Weissenbach; Abdelghani Sghir
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

3.  Microbial community structures in anoxic freshwater lake sediment along a metal contamination gradient.

Authors:  Heidi L Gough; David A Stahl
Journal:  ISME J       Date:  2010-09-02       Impact factor: 10.302

4.  Competition and coexistence of sulfate-reducing and methanogenic populations in anaerobic biofilms.

Authors:  L Raskin; B E Rittmann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

  4 in total

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