Literature DB >> 16535160

Quantification of fungal hyphae in leaves of deciduous trees by automated image analysis.

O Daniel, F Schonholzer, J Zeyer.   

Abstract

An optical method to quantify the fungal hyphae within decomposing leaves of deciduous trees was developed. The plant matrix was partially destroyed under hydrolytic conditions, and fungal hyphae and cellulose residues within the leaves were stained with Calcofluor M2R. Cellulose residues were subsequently depolymerized by cellulase, and fungal hyphae were separated from the remaining plant matrix with a pressurized air-water mixture. An image analysis program to quantify the fungal hyphae was written. The program included the recognition of fungal hyphae, the elimination of stomata from the images, and the measuring of lengths of fungal hyphae. The optical method was verified by a chemical method relying on glucosamine as an indicator of fungal biomass. The fungal biomass in leaves of Fagus silvatica and Quercus petraea at early states of decomposition was 0.2 to 0.4% of the leaf weight. The biomass reached a maximum within 2 to 4 weeks (optical method, 0.5 to 0.7%; chemical method, 1 to 1.4% of the initial leaf weight) and decreased thereafter.

Entities:  

Year:  1995        PMID: 16535160      PMCID: PMC1388596          DOI: 10.1128/aem.61.11.3910-3918.1995

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  4 in total

1.  Conversion of biovolume measurements of soil organisms, grown under various moisture tensions, to biomass and their nutrient content.

Authors:  J A van Veen; E A Paul
Journal:  Appl Environ Microbiol       Date:  1979-04       Impact factor: 4.792

2.  Evidence for muramic acid in soil.

Authors:  W N Millar; L E Casida
Journal:  Can J Microbiol       Date:  1970-05       Impact factor: 2.419

3.  Theory of edge detection.

Authors:  D Marr; E Hildreth
Journal:  Proc R Soc Lond B Biol Sci       Date:  1980-02-29

4.  An improved gas chromatographic method for measuring glucosamine and muramic acid concentrations.

Authors:  R E Hicks; S Y Newell
Journal:  Anal Biochem       Date:  1983-02-01       Impact factor: 3.365

  4 in total
  1 in total

1.  Image-Processing Scheme to Detect Superficial Fungal Infections of the Skin.

Authors:  Ulf Mäder; Niko Quiskamp; Sören Wildenhain; Thomas Schmidts; Peter Mayser; Frank Runkel; Martin Fiebich
Journal:  Comput Math Methods Med       Date:  2015-11-16       Impact factor: 2.238

  1 in total

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