Literature DB >> 16535043

Total counts of marine bacteria include a large fraction of non-nucleoid-containing bacteria (ghosts).

U L Zweifel, A Hagstrom.   

Abstract

Counts of heterotrophic bacteria in marine waters are usually in the order of 5 x 10(sup5) to 3 x 10(sup6) bacteria ml(sup-1). These numbers are derived from unspecific fluorescent staining techniques (J. E. Hobbie, R. J. Daley, and S. Jasper, Appl. Environ. Microbiol. 33:1225-1228, 1977; K. G. Porter and Y. S. Feig, Limnol. Oceanogr. 25:943-948, 1980) and are subsequently defined as total counts of bacteria. In samples from the Baltic Sea, the North Sea (Skagerrak), and the northeastern Mediterranean Sea, we found that only a minor fraction (2 to 32%) of total counts can be scored as bacteria with nucleoids. Lack of DNA no doubt means inactive cells; therefore, a much lower number of bacteria that grow at rates higher than those previously estimated must be responsible for the measured bacterial production in these seas. The remaining bacterium-sized and/or -shaped particles included in total counts may be cell residues of virus-lysed bacteria (ghosts) or remains of protozoan grazing.

Entities:  

Year:  1995        PMID: 16535043      PMCID: PMC1388461          DOI: 10.1128/aem.61.6.2180-2185.1995

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  14 in total

1.  The use of fluorescent DNA-binding agent for detecting and separating yeast mitochondrial DNA.

Authors:  D H Williamson; D J Fennell
Journal:  Methods Cell Biol       Date:  1975       Impact factor: 1.441

2.  Viability and isolation of marine bacteria by dilution culture: theory, procedures, and initial results.

Authors:  D K Button; F Schut; P Quang; R Martin; B R Robertson
Journal:  Appl Environ Microbiol       Date:  1993-03       Impact factor: 4.792

3.  Frequency of dividing cells, a new approach to the determination of bacterial growth rates in aquatic environments.

Authors:  A Hagström; U Larsson; P Hörstedt; S Normark
Journal:  Appl Environ Microbiol       Date:  1979-05       Impact factor: 4.792

4.  Improved method for determination of respiring individual microorganisms in natural waters.

Authors:  P S Tabor; R A Neihof
Journal:  Appl Environ Microbiol       Date:  1982-06       Impact factor: 4.792

5.  Bacterioplankton secondary production estimates for coastal waters of british columbia, antarctica, and california.

Authors:  J A Fuhrman; F Azam
Journal:  Appl Environ Microbiol       Date:  1980-06       Impact factor: 4.792

6.  A tentative direct microscopic method for counting living marine bacteria.

Authors:  K Kogure; U Simidu; N Taga
Journal:  Can J Microbiol       Date:  1979-03       Impact factor: 2.419

7.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

8.  Use of a fluorescent redox probe for direct visualization of actively respiring bacteria.

Authors:  G G Rodriguez; D Phipps; K Ishiguro; H F Ridgway
Journal:  Appl Environ Microbiol       Date:  1992-06       Impact factor: 4.792

9.  Autoradiography and epifluorescence microscopy combined for the determination of number and spectrum of actively metabolizing bacteria in natural water.

Authors:  L A Meyer-Reil
Journal:  Appl Environ Microbiol       Date:  1978-09       Impact factor: 4.792

10.  Optical Studies of the interaction of 4'-6'-diamidino-2-phenylindole with DNA and metaphase chromosomes.

Authors:  M S Lin; D E Comings; O S Alfi
Journal:  Chromosoma       Date:  1977-03-07       Impact factor: 4.316

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  55 in total

1.  Does the high nucleic acid content of individual bacterial cells allow us to discriminate between active cells and inactive cells in aquatic systems?

Authors:  P Lebaron; P Servais; H Agogué; C Courties; F Joux
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

2.  Spatial heterogeneity of bacterial populations along an environmental gradient at a shallow submarine hydrothermal vent near Milos Island (Greece).

Authors:  S M Sievert; T Brinkhoff; G Muyzer; W Ziebis; J Kuever
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

3.  Resolution of viable and membrane-compromised bacteria in freshwater and marine waters based on analytical flow cytometry and nucleic acid double staining.

Authors:  G Grégori; S Citterio; A Ghiani; M Labra; S Sgorbati; S Brown; M Denis
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

4.  Combined microautoradiography-16S rRNA probe technique for determination of radioisotope uptake by specific microbial cell types in situ.

Authors:  C C Ouverney; J A Fuhrman
Journal:  Appl Environ Microbiol       Date:  1999-04       Impact factor: 4.792

5.  Application of neural computing methods for interpreting phospholipid fatty acid profiles of natural microbial communities.

Authors:  P A Noble; J S Almeida; C R Lovell
Journal:  Appl Environ Microbiol       Date:  2000-02       Impact factor: 4.792

6.  Large fraction of dead and inactive bacteria in coastal marine sediments: comparison of protocols for determination and ecological significance.

Authors:  G M Luna; E Manini; R Danovaro
Journal:  Appl Environ Microbiol       Date:  2002-07       Impact factor: 4.792

7.  Single-cell enumeration of an uncultivated TM7 subgroup in the human subgingival crevice.

Authors:  Cleber C Ouverney; Gary C Armitage; David A Relman
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

Review 8.  Selected fluorescent techniques for identification of the physiological state of individual water and soil bacterial cells - review.

Authors:  S Lew; M Lew; T Mieszczyński; J Szarek
Journal:  Folia Microbiol (Praha)       Date:  2010-05-19       Impact factor: 2.099

9.  Abundances, identity, and growth state of actinobacteria in mountain lakes of different UV transparency.

Authors:  Falk Warnecke; Ruben Sommaruga; Raju Sekar; Julia S Hofer; Jakob Pernthaler
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

10.  Viral production, decay rates, and life strategies along a trophic gradient in the North Adriatic Sea.

Authors:  Lucia Bongiorni; Mirko Magagnini; Monica Armeni; Rachel Noble; Roberto Danovaro
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

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