Literature DB >> 16533846

Radiation target analyses of DNA template/primer complexes.

Nicolas Sluis-Cremer1, Ellis S Kempner.   

Abstract

Frozen solutions of low molecular weight DNA template/primer complexes, in the absence and presence of HIV-1 reverse transcriptase, were irradiated with high-energy electrons. Molecules that survived the radiation exposure were quantified and analyzed using radiation target theory. Transfer of radiation-deposited energy was observed by the damage caused. It was found that damage (as a polynucleotide chain break) was observed in one chain when the radiation interaction occurred in the other chain, suggesting a transfer of energy. In contrast, the target sizes of the DNA template/primers were not altered if bound to HIV-1 reverse transcriptase, signifying that the deposited radiation energy is not transferred between protein and nucleic acid.

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Year:  2006        PMID: 16533846      PMCID: PMC1432107          DOI: 10.1529/biophysj.106.083261

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  12 in total

1.  Structure-activity relationships in HIV-1 reverse transcriptase revealed by radiation target analysis.

Authors:  Nicolas Sluis-Cremer; Ellis Kempner; Michael A Parniak
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

2.  Direct effects of radiation on the avidin-biotin system. Absence of energy transfer.

Authors:  E S Kempner; J H Miller
Journal:  J Biol Chem       Date:  1990-09-15       Impact factor: 5.157

Review 3.  Effects of high-energy electrons and gamma rays directly on protein molecules.

Authors:  E S Kempner
Journal:  J Pharm Sci       Date:  2001-10       Impact factor: 3.534

4.  Rapid purification of homodimer and heterodimer HIV-1 reverse transcriptase by metal chelate affinity chromatography.

Authors:  S F Le Grice; F Grüninger-Leitch
Journal:  Eur J Biochem       Date:  1990-01-26

5.  Purification and characterization of human immunodeficiency virus type 1 reverse transcriptase.

Authors:  S F Le Grice; C E Cameron; S J Benkovic
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

6.  The mathematics of radiation target analyses.

Authors:  E S Kempner
Journal:  Bull Math Biol       Date:  1995-11       Impact factor: 1.758

7.  Molecular weight determinations from radiation inactivation.

Authors:  J T Harmon; T B Nielsen; E S Kempner
Journal:  Methods Enzymol       Date:  1985       Impact factor: 1.600

8.  Structure and functional implications of the polymerase active site region in a complex of HIV-1 RT with a double-stranded DNA template-primer and an antibody Fab fragment at 2.8 A resolution.

Authors:  J Ding; K Das; Y Hsiou; S G Sarafianos; A D Clark; A Jacobo-Molina; C Tantillo; S H Hughes; E Arnold
Journal:  J Mol Biol       Date:  1998-12-11       Impact factor: 5.469

9.  Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution.

Authors:  Curt A Davey; David F Sargent; Karolin Luger; Armin W Maeder; Timothy J Richmond
Journal:  J Mol Biol       Date:  2002-06-21       Impact factor: 5.469

10.  The functional unit of the arom conjugate in Neurospora.

Authors:  E S Kempner; K W Cole; F H Gaertner
Journal:  J Biol Chem       Date:  1982-08-10       Impact factor: 5.157

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  1 in total

1.  A radiation target method for size determination of supercoiled plasmid DNA.

Authors:  T J Anchordoquy; M dC Molina; E S Kempner
Journal:  Anal Biochem       Date:  2008-11-11       Impact factor: 3.365

  1 in total

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