Literature DB >> 16525763

Unified approach for multiple sclerosis lesion segmentation on brain MRI.

Balasrinivasa Rao Sajja1, Sushmita Datta, Renjie He, Meghana Mehta, Rakesh K Gupta, Jerry S Wolinsky, Ponnada A Narayana.   

Abstract

The presence of large number of false lesion classification on segmented brain MR images is a major problem in the accurate determination of lesion volumes in multiple sclerosis (MS) brains. In order to minimize the false lesion classifications, a strategy that combines parametric and nonparametric techniques is developed and implemented. This approach uses the information from the proton density (PD)- and T2-weighted and fluid attenuation inversion recovery (FLAIR) images. This strategy involves CSF and lesion classification using the Parzen window classifier. Image processing, morphological operations, and ratio maps of PD- and T2-weighted images are used for minimizing false positives. Contextual information is exploited for minimizing the false negative lesion classifications using hidden Markov random field-expectation maximization (HMRF-EM) algorithm. Lesions are delineated using fuzzy connectivity. The performance of this algorithm is quantitatively evaluated on 23 MS patients. Similarity index, percentages of over, under, and correct estimations of lesions are computed by spatially comparing the results of present procedure with expert manual segmentation. The automated processing scheme detected 80% of the manually segmented lesions in the case of low lesion load and 93% of the lesions in those cases with high lesion load.

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Year:  2006        PMID: 16525763      PMCID: PMC1463248          DOI: 10.1007/s10439-005-9009-0

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  15 in total

1.  Global optimization of mutual information: application to three-dimensional retrospective registration of magnetic resonance images.

Authors:  Renjie He; Ponnada A Narayana
Journal:  Comput Med Imaging Graph       Date:  2002 Jul-Aug       Impact factor: 4.790

2.  Cortical lesions in multiple sclerosis: combined postmortem MR imaging and histopathology.

Authors:  Jeroen J G Geurts; Lars Bö; Petra J W Pouwels; Jonas A Castelijns; Chris H Polman; Frederik Barkhof
Journal:  AJNR Am J Neuroradiol       Date:  2005-03       Impact factor: 3.825

3.  United States open-label glatiramer acetate extension trial for relapsing multiple sclerosis: MRI and clinical correlates. Multiple Sclerosis Study Group and the MRI Analysis Center.

Authors:  J S Wolinsky; P A Narayana; K P Johnson
Journal:  Mult Scler       Date:  2001-02       Impact factor: 6.312

4.  Nonlinear anisotropic filtering of MRI data.

Authors:  G Gerig; O Kubler; R Kikinis; F A Jolesz
Journal:  IEEE Trans Med Imaging       Date:  1992       Impact factor: 10.048

5.  Adaptive segmentation of MRI data.

Authors:  W M Wells; W L Grimson; R Kikinis; F A Jolesz
Journal:  IEEE Trans Med Imaging       Date:  1996       Impact factor: 10.048

6.  Comparing methods of measurement: why plotting difference against standard method is misleading.

Authors:  J M Bland; D G Altman
Journal:  Lancet       Date:  1995-10-21       Impact factor: 79.321

7.  New variants of a method of MRI scale standardization.

Authors:  L G Nyúl; J K Udupa; X Zhang
Journal:  IEEE Trans Med Imaging       Date:  2000-02       Impact factor: 10.048

8.  Automated segmentation of multiple sclerosis lesions by model outlier detection.

Authors:  K Van Leemput; F Maes; D Vandermeulen; A Colchester; P Suetens
Journal:  IEEE Trans Med Imaging       Date:  2001-08       Impact factor: 10.048

9.  Multiple sclerosis lesion quantification using fuzzy-connectedness principles.

Authors:  J K Udupa; L Wei; S Samarasekera; Y Miki; M A van Buchem; R I Grossman
Journal:  IEEE Trans Med Imaging       Date:  1997-10       Impact factor: 10.048

Review 10.  Role of magnetic resonance imaging within diagnostic criteria for multiple sclerosis.

Authors:  D H Miller; M Filippi; F Fazekas; J L Frederiksen; P M Matthews; X Montalban; C H Polman
Journal:  Ann Neurol       Date:  2004-08       Impact factor: 10.422

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  45 in total

1.  Longitudinal multiple sclerosis lesion segmentation: Resource and challenge.

Authors:  Aaron Carass; Snehashis Roy; Amod Jog; Jennifer L Cuzzocreo; Elizabeth Magrath; Adrian Gherman; Julia Button; James Nguyen; Ferran Prados; Carole H Sudre; Manuel Jorge Cardoso; Niamh Cawley; Olga Ciccarelli; Claudia A M Wheeler-Kingshott; Sébastien Ourselin; Laurence Catanese; Hrishikesh Deshpande; Pierre Maurel; Olivier Commowick; Christian Barillot; Xavier Tomas-Fernandez; Simon K Warfield; Suthirth Vaidya; Abhijith Chunduru; Ramanathan Muthuganapathy; Ganapathy Krishnamurthi; Andrew Jesson; Tal Arbel; Oskar Maier; Heinz Handels; Leonardo O Iheme; Devrim Unay; Saurabh Jain; Diana M Sima; Dirk Smeets; Mohsen Ghafoorian; Bram Platel; Ariel Birenbaum; Hayit Greenspan; Pierre-Louis Bazin; Peter A Calabresi; Ciprian M Crainiceanu; Lotta M Ellingsen; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2017-01-11       Impact factor: 6.556

2.  An automated procedure for the assessment of white matter hyperintensities by multispectral (T1, T2, PD) MRI and an evaluation of its between-centre reproducibility based on two large community databases.

Authors:  Pauline Maillard; Nicolas Delcroix; Fabrice Crivello; Carole Dufouil; Sebastien Gicquel; Marc Joliot; Nathalie Tzourio-Mazoyer; Annick Alpérovitch; Christophe Tzourio; Bernard Mazoyer
Journal:  Neuroradiology       Date:  2007-10-16       Impact factor: 2.804

3.  Volume and shape in feature space on adaptive FCM in MRI segmentation.

Authors:  Renjie He; Balasrinivasa Rao Sajja; Sushmita Datta; Ponnada A Narayana
Journal:  Ann Biomed Eng       Date:  2008-06-24       Impact factor: 3.934

4.  Generalized fuzzy clustering for segmentation of multi-spectral magnetic resonance images.

Authors:  Renjie He; Sushmita Datta; Balasrinivasa Rao Sajja; Ponnada A Narayana
Journal:  Comput Med Imaging Graph       Date:  2008-04-02       Impact factor: 4.790

5.  Segmentation of cerebrovascular pathologies in stroke patients with spatial and shape priors.

Authors:  Adrian Vasile Dalca; Ramesh Sridharan; Lisa Cloonan; Kaitlin M Fitzpatrick; Allison Kanakis; Karen L Furie; Jonathan Rosand; Ona Wu; Mert Sabuncu; Natalia S Rost; Polina Golland
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

6.  Randomized study combining interferon and glatiramer acetate in multiple sclerosis.

Authors:  Fred D Lublin; Stacey S Cofield; Gary R Cutter; Robin Conwit; Ponnada A Narayana; Flavia Nelson; Amber R Salter; Tarah Gustafson; Jerry S Wolinsky
Journal:  Ann Neurol       Date:  2013-03-11       Impact factor: 10.422

7.  New multispectral MRI data fusion technique for white matter lesion segmentation: method and comparison with thresholding in FLAIR images.

Authors:  Maria del C Valdés Hernández; Karen J Ferguson; Francesca M Chappell; Joanna M Wardlaw
Journal:  Eur Radiol       Date:  2010-02-16       Impact factor: 5.315

8.  Comprehensive brain MRI segmentation in high risk preterm newborns.

Authors:  Xintian Yu; Yanjie Zhang; Robert E Lasky; Sushmita Datta; Nehal A Parikh; Ponnada A Narayana
Journal:  PLoS One       Date:  2010-11-08       Impact factor: 3.240

9.  Automatic segmentation of white matter hyperintensities in the elderly using FLAIR images at 3T.

Authors:  Erin Gibson; Fuqiang Gao; Sandra E Black; Nancy J Lobaugh
Journal:  J Magn Reson Imaging       Date:  2010-06       Impact factor: 4.813

10.  Multiple sclerosis lesion detection using constrained GMM and curve evolution.

Authors:  Oren Freifeld; Hayit Greenspan; Jacob Goldberger
Journal:  Int J Biomed Imaging       Date:  2009-09-10
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