Literature DB >> 12056571

Dissociation of different conformations of ubiquitin ions.

Ethan R Badman1, Cherokee S Hoaglund-Hyzer, David E Clemmer.   

Abstract

The fragmentation pathways of different conformations of three charge states of ubiquitin ions are examined using ion mobility/collisional activation/time-of-flight techniques. Mass spectra for fragments for different conformers of a single charge state appear to be identical (within the experimental reproducibility). These results are consistent with a mechanism in which different conformers of each charge state rearrange to similar dissociation transition states prior to fragment formation.

Mesh:

Substances:

Year:  2002        PMID: 12056571     DOI: 10.1016/S1044-0305(02)00374-4

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  31 in total

1.  Gas phase H/D exchange kinetics: DI versus D2O.

Authors:  T G Schaaff; J L Stephenson; S A McLuckey
Journal:  J Am Soc Mass Spectrom       Date:  2000-02       Impact factor: 3.109

2.  Mobility labeling for parallel CID of ion mixtures.

Authors:  C S Hoaglund-Hyzer; J Li; D E Clemmer
Journal:  Anal Chem       Date:  2000-07-01       Impact factor: 6.986

3.  Charge-state-dependent sequence analysis of protonated ubiquitin ions via ion trap tandem mass spectrometry.

Authors:  G E Reid; J Wu; P A Chrisman; J M Wells; S A McLuckey
Journal:  Anal Chem       Date:  2001-07-15       Impact factor: 6.986

4.  High-resolution tandem mass spectrometry of large biomolecules.

Authors:  J A Loo; J P Quinn; S I Ryu; K D Henry; M W Senko; F W McLafferty
Journal:  Proc Natl Acad Sci U S A       Date:  1992-01-01       Impact factor: 11.205

5.  Proton transfer reaction studies of multiply charged proteins in a high mass-to-charge ratio quadrupole mass spectrometer.

Authors:  R R Ogorzalek Loo; B E Winger; R D Smith
Journal:  J Am Soc Mass Spectrom       Date:  1994-12       Impact factor: 3.109

6.  Effects of charge state on fragmentation pathways, dynamics, and activation energies of ubiquitin ions measured by blackbody infrared radiative dissociation.

Authors:  R A Jockusch; P D Schnier; W D Price; E F Strittmatter; P A Demirev; E R Williams
Journal:  Anal Chem       Date:  1997-03-15       Impact factor: 6.986

7.  Tandem mass spectrometry of very large molecules. 2. Dissociation of multiply charged proline-containing proteins from electrospray ionization.

Authors:  J A Loo; C G Edmonds; R D Smith
Journal:  Anal Chem       Date:  1993-02-15       Impact factor: 6.986

8.  Effect of reducing disulfide-containing proteins on electrospray ionization mass spectra.

Authors:  J A Loo; C G Edmonds; H R Udseth; R D Smith
Journal:  Anal Chem       Date:  1990-04-01       Impact factor: 6.986

9.  Dissociation of heme-globin complexes by blackbody infrared radiative dissociation: molecular specificity in the gas phase?

Authors:  D S Gross; Y Zhao; E R Williams
Journal:  J Am Soc Mass Spectrom       Date:  1997-05       Impact factor: 3.109

10.  Blackbody infrared radiative dissociation of bradykinin and its analogues: energetics, dynamics, and evidence for salt-bridge structures in the gas phase.

Authors:  P D Schnier; W D Price; R A Jockusch; E R Williams
Journal:  J Am Chem Soc       Date:  1996-07-31       Impact factor: 15.419

View more
  23 in total

1.  Effects of ion/ion proton transfer reactions on conformation of gas-phase cytochrome c ions.

Authors:  Qin Zhao; Gregg M Schieffer; Matthew W Soyk; Timothy J Anderson; R S Houk; Ethan R Badman
Journal:  J Am Soc Mass Spectrom       Date:  2010-03-31       Impact factor: 3.109

2.  Multidimensional separations of ubiquitin conformers in the gas phase: relating ion cross sections to H/D exchange measurements.

Authors:  Errol W Robinson; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2005-09       Impact factor: 3.109

3.  The role of conformation on electron capture dissociation of ubiquitin.

Authors:  Errol W Robinson; Ryan D Leib; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2006-08-04       Impact factor: 3.109

4.  Peptide conformation in gas phase probed by collision-induced dissociation and its correlation to conformation in condensed phases.

Authors:  Zhongqi Zhang; Joseph Bordas-Nagy
Journal:  J Am Soc Mass Spectrom       Date:  2006-04-03       Impact factor: 3.109

5.  Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors.

Authors:  Danielle L Swaney; Graeme C McAlister; Matthew Wirtala; Jae C Schwartz; John E P Syka; Joshua J Coon
Journal:  Anal Chem       Date:  2007-01-15       Impact factor: 6.986

6.  Transfer of structural elements from compact to extended states in unsolvated ubiquitin.

Authors:  Stormy L Koeniger; Samuel I Merenbloom; Sundarapandian Sevugarajan; David E Clemmer
Journal:  J Am Chem Soc       Date:  2006-09-06       Impact factor: 15.419

7.  On the dynamics of fragment isomerization in collision-induced dissociation of peptides.

Authors:  Nick C Polfer; Brian C Bohrer; Manolo D Plasencia; Béla Paizs; David E Clemmer
Journal:  J Phys Chem A       Date:  2008-01-24       Impact factor: 2.781

8.  An ion trap-ion mobility-time of flight mass spectrometer with three ion sources for ion/ion reactions.

Authors:  Qin Zhao; Matthew W Soyk; Gregg M Schieffer; Katrin Fuhrer; Marc M Gonin; R S Houk; Ethan R Badman
Journal:  J Am Soc Mass Spectrom       Date:  2009-05-04       Impact factor: 3.109

9.  Characterization of hydrogen bonding motifs in proteins: hydrogen elimination monitoring by ultraviolet photodissociation mass spectrometry.

Authors:  Lindsay J Morrison; Wenrui Chai; Jake A Rosenberg; Graeme Henkelman; Jennifer S Brodbelt
Journal:  Phys Chem Chem Phys       Date:  2017-08-02       Impact factor: 3.676

10.  Nonergodic and conformational control of the electron capture dissociation of protein cations.

Authors:  Kathrin Breuker; HanBin Oh; Cheng Lin; Barry K Carpenter; Fred W McLafferty
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-20       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.