Literature DB >> 16522796

Cofactor effects on the protein folding reaction: acceleration of alpha-lactalbumin refolding by metal ions.

Natalia A Bushmarina1, Clément E Blanchet, Grégory Vernier, Vincent Forge.   

Abstract

About 30% of proteins require cofactors for their proper folding. The effects of cofactors on the folding reaction have been investigated with alpha-lactalbumin as a model protein and metal ions as cofactors. Metal ions accelerate the refolding of alpha-lactalbumin by lessening the energy barrier between the molten globule state and the transition state, mainly by decreasing the difference of entropy between the two states. These effects are linked to metal ion binding to the protein in the native state. Hence, relationships between the metal affinities for the intermediate states and those for the native state are observed. Some residual specificity for the calcium ion is still observed in the molten globule state, this specificity getting closer in the transition state to that of the native state. The comparison between kinetic and steady-state data in association with the Phi value method indicates the binding of the metal ions on the unfolded state of alpha-lactalbumin. Altogether, these results provide insight into cofactor effects on protein folding. They also suggest new possibilities to investigate the presence of residual native structures in the unfolded state of protein and the effects of such structures on the protein folding reaction and on protein stability.

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Year:  2006        PMID: 16522796      PMCID: PMC2242491          DOI: 10.1110/ps.051904206

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  41 in total

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Authors:  A R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

2.  Transient non-native secondary structures during the refolding of alpha-lactalbumin detected by infrared spectroscopy.

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Journal:  Nat Struct Biol       Date:  2000-01

3.  Modulation of compactness and long-range interactions of unfolded lysozyme by single point mutations.

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Journal:  Angew Chem Int Ed Engl       Date:  2004-11-05       Impact factor: 15.336

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Authors:  G I Makhatadze; P L Privalov
Journal:  Protein Sci       Date:  1996-03       Impact factor: 6.725

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Authors:  P A Dalby; M Oliveberg; A R Fersht
Journal:  J Mol Biol       Date:  1998-02-27       Impact factor: 5.469

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Journal:  Nat Struct Biol       Date:  1997-01

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Journal:  Nat Struct Biol       Date:  1995-10

Review 8.  The molten globule state of alpha-lactalbumin.

Authors:  K Kuwajima
Journal:  FASEB J       Date:  1996-01       Impact factor: 5.191

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Authors:  K H Lee; D Xie; E Freire; L M Amzel
Journal:  Proteins       Date:  1994-09

Review 10.  alpha-Lactalbumin: structure and function.

Authors:  E A Permyakov; L J Berliner
Journal:  FEBS Lett       Date:  2000-05-19       Impact factor: 4.124

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  11 in total

1.  In silico profiling and structural insights of zinc metal ion on O6-methylguanine methyl transferase and its interactions using molecular dynamics approach.

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Journal:  J Mol Model       Date:  2021-01-17       Impact factor: 1.810

2.  Protein folding and unfolding studied at atomic resolution by fast two-dimensional NMR spectroscopy.

Authors:  Paul Schanda; Vincent Forge; Bernhard Brutscher
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-25       Impact factor: 11.205

3.  AmpI Functions as an Iron Exporter To Alleviate β-Lactam-Mediated Reactive Oxygen Species Stress in Stenotrophomonas maltophilia.

Authors:  Yi-Wei Huang; Hsin-Hui Huang; Kai-Hung Huang; Wei-Chien Chen; Yi-Tsung Lin; Cheng-Chih Hsu; Tsuey-Ching Yang
Journal:  Antimicrob Agents Chemother       Date:  2019-03-27       Impact factor: 5.191

Review 4.  Protein folding in the cell envelope of Escherichia coli.

Authors:  Jozefien De Geyter; Alexandra Tsirigotaki; Georgia Orfanoudaki; Valentina Zorzini; Anastassios Economou; Spyridoula Karamanou
Journal:  Nat Microbiol       Date:  2016-07-26       Impact factor: 17.745

5.  Escherichia coli Free Radical-Based Killing Mechanism Driven by a Unique Combination of Iron Restriction and Certain Antibiotics.

Authors:  Li Ma; Yongjun Gao; Anthony W Maresso
Journal:  J Bacteriol       Date:  2015-09-21       Impact factor: 3.490

Review 6.  α-Lactalbumin, Amazing Calcium-Binding Protein.

Authors:  Eugene A Permyakov
Journal:  Biomolecules       Date:  2020-08-20

7.  Protein phosphorylation corrects the folding defect of the neuroblastoma (S120G) mutant of human nucleoside diphosphate kinase A/Nm23-H1.

Authors:  Iulia Mocan; Florian Georgescauld; Philippe Gonin; Didier Thoraval; Laura Cervoni; Anna Giartosio; Sandrine Dabernat-Arnaud; Marc Crouzet; Marie-Lise Lacombe; Ioan Lascu
Journal:  Biochem J       Date:  2007-04-01       Impact factor: 3.857

8.  Independent of their localization in protein the hydrophobic amino acid residues have no effect on the molten globule state of apomyoglobin and the disulfide bond on the surface of apomyoglobin stabilizes this intermediate state.

Authors:  Tatiana N Melnik; Maria A Majorina; Daria S Larina; Ivan A Kashparov; Ekaterina N Samatova; Anatoly S Glukhov; Bogdan S Melnik
Journal:  PLoS One       Date:  2014-06-03       Impact factor: 3.240

Review 9.  Cofactor engineering for enhancing the flux of metabolic pathways.

Authors:  M Kalim Akhtar; Patrik R Jones
Journal:  Front Bioeng Biotechnol       Date:  2014-08-28

Review 10.  Interactions of Whey Proteins with Metal Ions.

Authors:  Agnieszka Rodzik; Paweł Pomastowski; Gulyaim N Sagandykova; Bogusław Buszewski
Journal:  Int J Mol Sci       Date:  2020-03-20       Impact factor: 5.923

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