Literature DB >> 16513760

Genomic comparison of Mycobacterium avium subsp. paratuberculosis sheep and cattle strains by microarray hybridization.

Ian B Marsh1, John P Bannantine, Michael L Paustian, Mark L Tizard, Vivek Kapur, Richard J Whittington.   

Abstract

Microarray-based comparisons of three Mycobacterium avium subsp. paratuberculosis isolates, including one sheep strain and two cattle strains, identified three large genomic deletions in the sheep strain, totaling 29,208 bp and involving 24 open reading frames. These deletions may help explain some of the differences in pathogenicity and host specificity observed between the cattle and sheep strains of Mycobacterium avium subsp. paratuberculosis.

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Year:  2006        PMID： 16513760      PMCID： PMC1428150          DOI： 10.1128/JB.188.6.2290-2293.2006

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

1.  Mycobacterium avium subsp. paratuberculosis strains from cattle and sheep can be distinguished by a PCR test based on a novel DNA sequence difference.

Authors:  Desmond M Collins; May De Zoete; Sonia M Cavaignac
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

2.  The complete genome sequence of Mycobacterium avium subspecies paratuberculosis.

Authors:  Lingling Li; John P Bannantine; Qing Zhang; Alongkorn Amonsin; Barbara J May; David Alt; Nilanjana Banerji; Sagarika Kanjilal; Vivek Kapur
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-22       Impact factor: 11.205

3.  Genomic polymorphisms for Mycobacterium avium subsp. paratuberculosis diagnostics.

Authors:  Makeda Semret; David C Alexander; Christine Y Turenne; Petra de Haas; Pieter Overduin; Dick van Soolingen; Debby Cousins; Marcel A Behr
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

4.  Comparative genomic hybridizations reveal genetic regions within the Mycobacterium avium complex that are divergent from Mycobacterium avium subsp. paratuberculosis isolates.

Authors:  Michael L Paustian; Vivek Kapur; John P Bannantine
Journal:  J Bacteriol       Date:  2005-04       Impact factor: 3.490

5.  Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis: IS900 restriction fragment length polymorphism and IS1311 polymorphism analyses of isolates from animals and a human in Australia.

Authors:  R J Whittington; A F Hope; D J Marshall; C A Taragel; I Marsh
Journal:  J Clin Microbiol       Date:  2000-09       Impact factor: 5.948

6.  Identification of two groups of Mycobacterium paratuberculosis strains by restriction endonuclease analysis and DNA hybridization.

Authors:  D M Collins; D M Gabric; G W de Lisle
Journal:  J Clin Microbiol       Date:  1990-07       Impact factor: 5.948

7.  Deletion of an mmpL gene and multiple associated genes from the genome of the S strain of Mycobacterium avium subsp. paratuberculosis identified by representational difference analysis and in silico analysis.

Authors:  I B Marsh; R J Whittington
Journal:  Mol Cell Probes       Date:  2005-10-14       Impact factor: 2.365

8.  Polymorphisms in IS1311, an insertion sequence common to Mycobacterium avium and M. avium subsp. paratuberculosis, can be used to distinguish between and within these species.

Authors:  R Whittington; I Marsh; E Choy; D Cousins
Journal:  Mol Cell Probes       Date:  1998-12       Impact factor: 2.365

9.  Extensive genomic polymorphism within Mycobacterium avium.

Authors:  Makeda Semret; Gary Zhai; Serge Mostowy; Cynthia Cleto; David Alexander; Gerard Cangelosi; Debby Cousins; Desmond M Collins; Dick van Soolingen; Marcel A Behr
Journal:  J Bacteriol       Date:  2004-09       Impact factor: 3.490

10.  Characterization of genetic differences between Mycobacterium avium subsp. paratuberculosis type I and type II isolates.

Authors:  Karen Dohmann; Birgit Strommenger; Karen Stevenson; Lucía de Juan; Janin Stratmann; Vivek Kapur; Tim J Bull; Gerald-Friedrich Gerlach
Journal:  J Clin Microbiol       Date:  2003-11       Impact factor: 5.948
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  29 in total

1.  Quantification of Mycobacterium avium subsp. paratuberculosis strains representing distinct genotypes and isolated from domestic and wildlife animal species by use of an automatic liquid culture system.

Authors:  Naiara Abendaño; Iker Sevilla; José M Prieto; Joseba M Garrido; Ramon A Juste; Marta Alonso-Hearn
Journal:  J Clin Microbiol       Date:  2012-05-30       Impact factor: 5.948

2.  Profiling bovine antibody responses to Mycobacterium avium subsp. paratuberculosis infection by using protein arrays.

Authors:  John P Bannantine; Michael L Paustian; W Ray Waters; Judith R Stabel; Mitchell V Palmer; Lingling Li; Vivek Kapur
Journal:  Infect Immun       Date:  2007-11-26       Impact factor: 3.441

3.  Discovery of stable and variable differences in the Mycobacterium avium subsp. paratuberculosis type I, II, and III genomes by pan-genome microarray analysis.

Authors:  Elena Castellanos; Alicia Aranaz; Katherine A Gould; Richard Linedale; Karen Stevenson; Julio Alvarez; Lucas Dominguez; Lucia de Juan; Jason Hinds; Tim J Bull
Journal:  Appl Environ Microbiol       Date:  2008-12-01       Impact factor: 4.792

4.  Adsorption of Mycobacterium avium subsp. paratuberculosis to soil particles.

Authors:  Navneet K Dhand; Jenny-Ann L M L Toribio; Richard J Whittington
Journal:  Appl Environ Microbiol       Date:  2009-06-26       Impact factor: 4.792

5.  Development and validation of a liquid medium (M7H9C) for routine culture of Mycobacterium avium subsp. paratuberculosis to replace modified Bactec 12B medium.

Authors:  Richard J Whittington; Ann-Michele Whittington; Anna Waldron; Douglas J Begg; Kumi de Silva; Auriol C Purdie; Karren M Plain
Journal:  J Clin Microbiol       Date:  2013-09-18       Impact factor: 5.948

6.  Species of environmental mycobacteria differ in their abilities to grow in human, mouse, and carp macrophages and with regard to the presence of mycobacterial virulence genes, as observed by DNA microarray hybridization.

Authors:  Melanie J Harriff; Martin Wu; Michael L Kent; Luiz E Bermudez
Journal:  Appl Environ Microbiol       Date:  2007-11-02       Impact factor: 4.792

7.  Environmental survival of Mycobacterium avium subsp. paratuberculosis in different climatic zones of eastern Australia.

Authors:  Jeffrey Eppleston; Douglas J Begg; Navneet K Dhand; Bruce Watt; Richard J Whittington
Journal:  Appl Environ Microbiol       Date:  2014-01-24       Impact factor: 4.792

8.  Iron-sparing response of Mycobacterium avium subsp. paratuberculosis is strain dependent.

Authors:  Harish K Janagama; John P Bannantine; Abirami Kugadas; Pratik Jagtap; LeeAnn Higgins; Bruce Witthuhn; Srinand Sreevatsan
Journal:  BMC Microbiol       Date:  2010-10-22       Impact factor: 3.605

9.  Sequence polymorphisms in a surface PPE protein distinguish types I, II, and III of Mycobacterium avium subsp. paratuberculosis.

Authors:  Tanya A Griffiths; Kevin Rioux; Jeroen De Buck
Journal:  J Clin Microbiol       Date:  2008-02-13       Impact factor: 5.948

10.  Occurrence of Mycobacterium avium subspecies paratuberculosis across host species and European countries with evidence for transmission between wildlife and domestic ruminants.

Authors:  Karen Stevenson; Julio Alvarez; Douwe Bakker; Franck Biet; Lucia de Juan; Susan Denham; Zoi Dimareli; Karen Dohmann; Gerald F Gerlach; Ian Heron; Marketa Kopecna; Linda May; Ivo Pavlik; J Michael Sharp; Virginie C Thibault; Peter Willemsen; Ruth N Zadoks; Alastair Greig
Journal:  BMC Microbiol       Date:  2009-10-07       Impact factor: 3.605
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