Literature DB >> 16513175

The role of the heme propionates in heme biochemistry.

Victor Guallar1, Brett Olsen.   

Abstract

There are numerous studies, relying on both experimental and theoretical observations, illustrating the active role of the heme propionates in regulating electron delivery to the iron center as well as biochemical properties of the heme. Evidences for this come from a wide variety of heme containing systems: cytochromes, heme peroxidases, globins, etc. Here, we shortly summarize these studies and revisit previous theoretical calculations (V. Guallar, M.H. Baik, S.J. Lippard, R.A. Friesner, Proc. Natl. Acad. Sci. USA 100 (2003) 6998-7002) where the propionate groups induced the delocalization of the spin density in the cytochrome P450cam putative active species, Compound I. We introduce novel data, obtained by means of mixed quantum mechanics and molecular mechanics methods, indicating a larger electron delocalization into the protein. We also present novel results based on the recent migration of spin density observed by Barrows et al. (T.P. Barrows, T.L. Poulos, Biochemistry 44 (2005) 14062-68) on an ascorbate peroxidase mutant. All this data strongly supports the importance of the propionate groups in tuning the heme electronic properties.

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Year:  2006        PMID: 16513175     DOI: 10.1016/j.jinorgbio.2006.01.019

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  16 in total

1.  Ascorbate protects the diheme enzyme, MauG, against self-inflicted oxidative damage by an unusual antioxidant mechanism.

Authors:  Zhongxin Ma; Victor L Davidson
Journal:  Biochem J       Date:  2017-07-17       Impact factor: 3.857

2.  The effect of heme environment on the hydrogen abstraction reaction of camphor in P450cam catalysis: a QM/MM study.

Authors:  Ahmet Altun; Victor Guallar; Richard A Friesner; Sason Shaik; Walter Thiel
Journal:  J Am Chem Soc       Date:  2006-03-29       Impact factor: 15.419

3.  Tyrosine B10 triggers a heme propionate hydrogen bonding network loop with glutamine E7 moiety.

Authors:  Brenda J Ramos-Santana; Juan López-Garriga
Journal:  Biochem Biophys Res Commun       Date:  2012-07-15       Impact factor: 3.575

Review 4.  Heme enzyme structure and function.

Authors:  Thomas L Poulos
Journal:  Chem Rev       Date:  2014-01-08       Impact factor: 60.622

Review 5.  Thirty years of heme peroxidase structural biology.

Authors:  Thomas L Poulos
Journal:  Arch Biochem Biophys       Date:  2010-03-03       Impact factor: 4.013

6.  Identification and characterization of solvent-filled channels in human ferrochelatase.

Authors:  Amy E Medlock; Wided Najahi-Missaoui; Teresa A Ross; Tamara A Dailey; Joseph Burch; Jessica R O'Brien; William N Lanzilotta; Harry A Dailey
Journal:  Biochemistry       Date:  2012-06-28       Impact factor: 3.162

7.  Heme-bound SiaA from Streptococcus pyogenes: Effects of mutations and oxidation state on protein stability.

Authors:  Neval Akbas; Elizabeth B Draganova; Darci R Block; Brian R Sook; Yau Fong Chan; Joy Zhuo; Zehava Eichenbaum; Kenton R Rodgers; Dabney W Dixon
Journal:  J Inorg Biochem       Date:  2015-11-14       Impact factor: 4.155

8.  Communication between R481 and Cu(B) in cytochrome bo(3) ubiquinol oxidase from Escherichia coli.

Authors:  Tsuyoshi Egawa; Myat T Lin; Jonathan P Hosler; Robert B Gennis; Syun-Ru Yeh; Denis L Rousseau
Journal:  Biochemistry       Date:  2009-12-29       Impact factor: 3.162

9.  Structures of prostacyclin synthase and its complexes with substrate analog and inhibitor reveal a ligand-specific heme conformation change.

Authors:  Yi-Ching Li; Chia-Wang Chiang; Hui-Chun Yeh; Pei-Yung Hsu; Frank G Whitby; Lee-Ho Wang; Nei-Li Chan
Journal:  J Biol Chem       Date:  2007-11-21       Impact factor: 5.157

10.  Mapping protein electron transfer pathways with QM/MM methods.

Authors:  Victor Guallar; Frank Wallrapp
Journal:  J R Soc Interface       Date:  2008-12-06       Impact factor: 4.118

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