Literature DB >> 16511322

Crystallization and preliminary X-ray analysis of a bacterial L-amino-acid oxidase from Rhodococcus opacus.

Annette Faust1, Birgit Geueke, Karsten Niefind, Werner Hummel, Dietmar Schomburg.   

Abstract

L-Amino-acid oxidases (EC 1.4.3.2) catalyse the stereospecific oxidative deamination of an L-amino-acid substrate to an alpha-keto acid with the production of ammonia and hydrogen peroxide. In this study, the crystallization and preliminary X-ray analysis of a bacterial L-amino-acid oxidase from Rhodococcus opacus (RoLAAO) is described. RoLAAO is a dimeric protein consisting of two identical subunits of 489 amino acids with a calculated molecular weight of 54.2 kDa and a non-covalently bound FAD molecule. RoLAAO was crystallized by the vapour-diffusion method in two different space groups: P2(1)2(1)2(1) (unit-cell parameters a = 65.7, b = 109.7, c = 134.4 A) and C222(1) (unit-cell parameters a = 68.3, b = 88.4, c = 186.6 A). Both crystal forms diffracted X-rays to a resolution of at least 1.6 A.

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Year:  2006        PMID: 16511322      PMCID: PMC2197183          DOI: 10.1107/S1744309106005689

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  24 in total

1.  New sequence motifs in flavoproteins: evidence for common ancestry and tools to predict structure.

Authors:  O Vallon
Journal:  Proteins       Date:  2000-01-01

2.  Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0.

Authors:  G Bricogne; C Vonrhein; C Flensburg; M Schiltz; W Paciorek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-10-23

3.  Purification and properties of the L-amino acid oxidase from monocellate cobra (Naja naja kaouthia) venom.

Authors:  N H Tan; S Swaminathan
Journal:  Int J Biochem       Date:  1992-06

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Participation of an extracellular deaminase in amino acid utilization by Neurospora crassa.

Authors:  R M DeBusk; S Ogilvie
Journal:  J Bacteriol       Date:  1984-08       Impact factor: 3.490

6.  The x-ray structure of D-amino acid oxidase at very high resolution identifies the chemical mechanism of flavin-dependent substrate dehydrogenation.

Authors:  S Umhau; L Pollegioni; G Molla; K Diederichs; W Welte; M S Pilone; S Ghisla
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-07       Impact factor: 11.205

7.  The structure of L-amino acid oxidase reveals the substrate trajectory into an enantiomerically conserved active site.

Authors:  P D Pawelek; J Cheah; R Coulombe; P Macheroux; S Ghisla; A Vrielink
Journal:  EMBO J       Date:  2000-08-15       Impact factor: 11.598

8.  Apoxin I, a novel apoptosis-inducing factor with L-amino acid oxidase activity purified from Western diamondback rattlesnake venom.

Authors:  S Torii; M Naito; T Tsuruo
Journal:  J Biol Chem       Date:  1997-04-04       Impact factor: 5.157

9.  Purification and properties of the L-amino acid oxidase from Malayan pit viper (Calloselasma rhodostoma) venom.

Authors:  G Ponnudurai; M C Chung; N H Tan
Journal:  Arch Biochem Biophys       Date:  1994-09       Impact factor: 4.013

10.  Further characterization of a novel L-phenylalanine oxidase (deaminating and decarboxylating) from Pseudomonas sp. P-501.

Authors:  H Koyama
Journal:  J Biochem       Date:  1983-05       Impact factor: 3.387

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  2 in total

1.  Regulation of the Marinomonas mediterranea antimicrobial protein lysine oxidase by L-lysine and the sensor histidine kinase PpoS.

Authors:  Luisa R Molina-Quintero; Patricia Lucas-Elío; Antonio Sanchez-Amat
Journal:  Appl Environ Microbiol       Date:  2010-07-23       Impact factor: 4.792

Review 2.  Finding new enzymes from bacterial physiology: a successful approach illustrated by the detection of novel oxidases in Marinomonas mediterranea.

Authors:  Antonio Sanchez-Amat; Francisco Solano; Patricia Lucas-Elío
Journal:  Mar Drugs       Date:  2010-03-05       Impact factor: 5.118

  2 in total

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