Literature DB >> 16511133

Preparation, crystallization and preliminary X-ray analysis of XC2382, an ApaG protein of unknown structure from Xanthomonas campestris.

Ko-Hsin Chin1, Chia-Cheng Chou, Cheng-Chung Lee, Hui-Lin Shr, Ping-Chiang Lyu, Andrew H-J Wang, Shan-Ho Chou.   

Abstract

Xanthomonas campestris pv. campestris is the causative agent of black rot, one of the major worldwide diseases of cruciferous crops. Its genome encodes approximately 4500 proteins, roughly one third of which have unknown function. XC2382 is one such protein, with a MW of 14.2 kDa. Based on a bioinformatics study, it was annotated as an ApaG gene product that serves multiple functions. The ApaG protein has been overexpressed in Escherichia coli, purified and crystallized using the hanging-drop vapour-diffusion method. The crystals diffracted to a resolution of at least 2.30 A. They are tetragonal and belong to space group P4(1/3), with unit-cell parameters a = b = 57.6, c = 122.9 A. There are two, three or four molecules in the asymmetric unit.

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Year:  2005        PMID: 16511133      PMCID: PMC1952450          DOI: 10.1107/S1744309105018956

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  23 in total

1.  The stationary-phase morphogene bolA from Escherichia coli is induced by stress during early stages of growth.

Authors:  J M Santos; P Freire; M Vicente; C M Arraiano
Journal:  Mol Microbiol       Date:  1999-05       Impact factor: 3.501

2.  Genome sequence of the plant pathogen Ralstonia solanacearum.

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Journal:  Nature       Date:  2002-01-31       Impact factor: 49.962

3.  Involvement of the XpsN protein in formation of the XpsL-xpsM complex in Xanthomonas campestris pv. campestris type II secretion apparatus.

Authors:  H M Lee; S W Tyan; W M Leu; L Y Chen; D C Chen; N T Hu
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

4.  Novel genes involved in the regulation of pathogenicity factor production within the rpf gene cluster of Xanthomonas campestris.

Authors:  J M Dow; J X Feng; C E Barber; J L Tang; M J Daniels
Journal:  Microbiology       Date:  2000-04       Impact factor: 2.777

5.  The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis.

Authors:  A J Simpson; F C Reinach; P Arruda; F A Abreu; M Acencio; R Alvarenga; L M Alves; J E Araya; G S Baia; C S Baptista; M H Barros; E D Bonaccorsi; S Bordin; J M Bové; M R Briones; M R Bueno; A A Camargo; L E Camargo; D M Carraro; H Carrer; N B Colauto; C Colombo; F F Costa; M C Costa; C M Costa-Neto; L L Coutinho; M Cristofani; E Dias-Neto; C Docena; H El-Dorry; A P Facincani; A J Ferreira; V C Ferreira; J A Ferro; J S Fraga; S C França; M C Franco; M Frohme; L R Furlan; M Garnier; G H Goldman; M H Goldman; S L Gomes; A Gruber; P L Ho; J D Hoheisel; M L Junqueira; E L Kemper; J P Kitajima; J E Krieger; E E Kuramae; F Laigret; M R Lambais; L C Leite; E G Lemos; M V Lemos; S A Lopes; C R Lopes; J A Machado; M A Machado; A M Madeira; H M Madeira; C L Marino; M V Marques; E A Martins; E M Martins; A Y Matsukuma; C F Menck; E C Miracca; C Y Miyaki; C B Monteriro-Vitorello; D H Moon; M A Nagai; A L Nascimento; L E Netto; A Nhani; F G Nobrega; L R Nunes; M A Oliveira; M C de Oliveira; R C de Oliveira; D A Palmieri; A Paris; B R Peixoto; G A Pereira; H A Pereira; J B Pesquero; R B Quaggio; P G Roberto; V Rodrigues; A J de M Rosa; V E de Rosa; R G de Sá; R V Santelli; H E Sawasaki; A C da Silva; A M da Silva; F R da Silva; W A da Silva; J F da Silveira; M L Silvestri; W J Siqueira; A A de Souza; A P de Souza; M F Terenzi; D Truffi; S M Tsai; M H Tsuhako; H Vallada; M A Van Sluys; S Verjovski-Almeida; A L Vettore; M A Zago; M Zatz; J Meidanis; J C Setubal
Journal:  Nature       Date:  2000-07-13       Impact factor: 49.962

6.  cDNA cloning and expression analysis of new members of the mammalian F-box protein family.

Authors:  G P Ilyin; M Rialland; C Pigeon; C Guguen-Guillouzo
Journal:  Genomics       Date:  2000-07-01       Impact factor: 5.736

7.  The COG database: new developments in phylogenetic classification of proteins from complete genomes.

Authors:  R L Tatusov; D A Natale; I V Garkavtsev; T A Tatusova; U T Shankavaram; B S Rao; B Kiryutin; M Y Galperin; N D Fedorova; E V Koonin
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

8.  Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.

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9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  High-throughput screening of soluble recombinant proteins.

Authors:  Yan-Ping Shih; Wen-Mei Kung; Jui-Chuan Chen; Chia-Hui Yeh; Andrew H-J Wang; Ting-Fang Wang
Journal:  Protein Sci       Date:  2002-07       Impact factor: 6.725

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  2 in total

1.  Targeting F box protein Fbxo3 to control cytokine-driven inflammation.

Authors:  Rama K Mallampalli; Tiffany A Coon; Jennifer R Glasser; Claire Wang; Sarah R Dunn; Nathaniel M Weathington; Jing Zhao; Chunbin Zou; Yutong Zhao; Bill B Chen
Journal:  J Immunol       Date:  2013-10-11       Impact factor: 5.422

2.  A combinatorial F box protein directed pathway controls TRAF adaptor stability to regulate inflammation.

Authors:  Bill B Chen; Tiffany A Coon; Jennifer R Glasser; Bryan J McVerry; Jing Zhao; Yutong Zhao; Chunbin Zou; Bryon Ellis; Frank C Sciurba; Yingze Zhang; Rama K Mallampalli
Journal:  Nat Immunol       Date:  2013-03-31       Impact factor: 25.606

  2 in total

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