Literature DB >> 16511130

Preparation, crystallization and preliminary X-ray characterization of a conserved hypothetical protein XC1692 from Xanthomonas campestris.

Ko-Hsin Chin1, Zhao-Wei Huang, Kun-Chou Wei, Chia-Cheng Chou, Cheng-Chung Lee, Hui-Lin Shr, Fei Philip Gao, Ping-Chiang Lyu, Andrew H-J Wang, Shan-Ho Chou.   

Abstract

Xanthomonas campestris pv. campestris strain 17 is a Gram-negative yellow-pigmented pathogenic bacterium that causes black rot, one of the major worldwide diseases of cruciferous crops. Its genome contains approximately 4500 genes, one third of which have no known structure and/or function yet are highly conserved among several different bacterial genuses. One of these gene products is XC1692 protein, containing 141 amino acids. It was overexpressed in Escherichia coli, purified and crystallized in a variety of forms using the hanging-drop vapour-diffusion method. The crystals diffract to at least 1.45 A resolution. They are hexagonal and belong to space group P6(3), with unit-cell parameters a = b = 56.9, c = 71.0 A. They contain one molecule per asymmetric unit.

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Year:  2005        PMID: 16511130      PMCID: PMC1952469          DOI: 10.1107/S1744309105018798

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

1.  The Pfam protein families database.

Authors:  A Bateman; E Birney; R Durbin; S R Eddy; K L Howe; E L Sonnhammer
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Genome sequence of the plant pathogen Ralstonia solanacearum.

Authors:  M Salanoubat; S Genin; F Artiguenave; J Gouzy; S Mangenot; M Arlat; A Billault; P Brottier; J C Camus; L Cattolico; M Chandler; N Choisne; C Claudel-Renard; S Cunnac; N Demange; C Gaspin; M Lavie; A Moisan; C Robert; W Saurin; T Schiex; P Siguier; P Thébault; M Whalen; P Wincker; M Levy; J Weissenbach; C A Boucher
Journal:  Nature       Date:  2002-01-31       Impact factor: 49.962

3.  Crystal structure of conserved hypothetical protein Aq1575 from Aquifex aeolicus.

Authors:  Dong Hae Shin; Hisao Yokota; Rosalind Kim; Sung-Hou Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

4.  Inference of protein function from protein structure.

Authors:  Debnath Pal; David Eisenberg
Journal:  Structure       Date:  2005-01       Impact factor: 5.006

5.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  [28] Phase determination from multiwavelength anomalous diffraction measurements.

Authors:  Wayne A Hendrickson; Craig M Ogata
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

7.  [25] Overview of isomorphous replacement phasing.

Authors:  Hengming Ke
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

8.  The genome sequence of the plant pathogen Xylella fastidiosa. The Xylella fastidiosa Consortium of the Organization for Nucleotide Sequencing and Analysis.

Authors:  A J Simpson; F C Reinach; P Arruda; F A Abreu; M Acencio; R Alvarenga; L M Alves; J E Araya; G S Baia; C S Baptista; M H Barros; E D Bonaccorsi; S Bordin; J M Bové; M R Briones; M R Bueno; A A Camargo; L E Camargo; D M Carraro; H Carrer; N B Colauto; C Colombo; F F Costa; M C Costa; C M Costa-Neto; L L Coutinho; M Cristofani; E Dias-Neto; C Docena; H El-Dorry; A P Facincani; A J Ferreira; V C Ferreira; J A Ferro; J S Fraga; S C França; M C Franco; M Frohme; L R Furlan; M Garnier; G H Goldman; M H Goldman; S L Gomes; A Gruber; P L Ho; J D Hoheisel; M L Junqueira; E L Kemper; J P Kitajima; J E Krieger; E E Kuramae; F Laigret; M R Lambais; L C Leite; E G Lemos; M V Lemos; S A Lopes; C R Lopes; J A Machado; M A Machado; A M Madeira; H M Madeira; C L Marino; M V Marques; E A Martins; E M Martins; A Y Matsukuma; C F Menck; E C Miracca; C Y Miyaki; C B Monteriro-Vitorello; D H Moon; M A Nagai; A L Nascimento; L E Netto; A Nhani; F G Nobrega; L R Nunes; M A Oliveira; M C de Oliveira; R C de Oliveira; D A Palmieri; A Paris; B R Peixoto; G A Pereira; H A Pereira; J B Pesquero; R B Quaggio; P G Roberto; V Rodrigues; A J de M Rosa; V E de Rosa; R G de Sá; R V Santelli; H E Sawasaki; A C da Silva; A M da Silva; F R da Silva; W A da Silva; J F da Silveira; M L Silvestri; W J Siqueira; A A de Souza; A P de Souza; M F Terenzi; D Truffi; S M Tsai; M H Tsuhako; H Vallada; M A Van Sluys; S Verjovski-Almeida; A L Vettore; M A Zago; M Zatz; J Meidanis; J C Setubal
Journal:  Nature       Date:  2000-07-13       Impact factor: 49.962

9.  The COG database: new developments in phylogenetic classification of proteins from complete genomes.

Authors:  R L Tatusov; D A Natale; I V Garkavtsev; T A Tatusova; U T Shankavaram; B S Rao; B Kiryutin; M Y Galperin; N D Fedorova; E V Koonin
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

10.  Comparison of the genomes of two Xanthomonas pathogens with differing host specificities.

Authors:  A C R da Silva; J A Ferro; F C Reinach; C S Farah; L R Furlan; R B Quaggio; C B Monteiro-Vitorello; M A Van Sluys; N F Almeida; L M C Alves; A M do Amaral; M C Bertolini; L E A Camargo; G Camarotte; F Cannavan; J Cardozo; F Chambergo; L P Ciapina; R M B Cicarelli; L L Coutinho; J R Cursino-Santos; H El-Dorry; J B Faria; A J S Ferreira; R C C Ferreira; M I T Ferro; E F Formighieri; M C Franco; C C Greggio; A Gruber; A M Katsuyama; L T Kishi; R P Leite; E G M Lemos; M V F Lemos; E C Locali; M A Machado; A M B N Madeira; N M Martinez-Rossi; E C Martins; J Meidanis; C F M Menck; C Y Miyaki; D H Moon; L M Moreira; M T M Novo; V K Okura; M C Oliveira; V R Oliveira; H A Pereira; A Rossi; J A D Sena; C Silva; R F de Souza; L A F Spinola; M A Takita; R E Tamura; E C Teixeira; R I D Tezza; M Trindade dos Santos; D Truffi; S M Tsai; F F White; J C Setubal; J P Kitajima
Journal:  Nature       Date:  2002-05-23       Impact factor: 49.962

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