Literature DB >> 16511072

Crystallization and preliminary X-ray diffraction analysis of a chitin-binding domain of hyperthermophilic chitinase from Pyrococcus furiosus.

Tsutomu Nakamura1, Kazuhiko Ishikawa, Yoshihisa Hagihara, Takashi Oku, Atsushi Nakagawa, Tsuyoshi Inoue, Mitsuo Ataka, Koichi Uegaki.   

Abstract

The crystallization and preliminary X-ray diffraction analysis of the chitin-binding domain of chitinase from a hyperthermophilic archaeon, Pyrococcus furiosus, are reported. The recombinant protein was prepared using an Escherichia coli overexpression system and was crystallized by the hanging-drop vapour-diffusion method. An X-ray diffraction data set was collected to 1.70 A resolution. The crystal belonged to space group P4(3)2(1)2 or P4(1)2(1)2. The unit-cell parameters were determined to be a = b = 48.8, c = 85.0 A.

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Year:  2005        PMID: 16511072      PMCID: PMC1952313          DOI: 10.1107/S1744309105010110

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  9 in total

1.  Evidence for synergy between family 2b carbohydrate binding modules in Cellulomonas fimi xylanase 11A.

Authors:  D N Bolam; H Xie; P White; P J Simpson; S M Hancock; M P Williamson; H J Gilbert
Journal:  Biochemistry       Date:  2001-02-27       Impact factor: 3.162

2.  Spectroscopic determination of tryptophan and tyrosine in proteins.

Authors:  H Edelhoch
Journal:  Biochemistry       Date:  1967-07       Impact factor: 3.162

3.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  A unique chitinase with dual active sites and triple substrate binding sites from the hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1.

Authors:  T Tanaka; S Fujiwara; S Nishikori; T Fukui; M Takagi; T Imanaka
Journal:  Appl Environ Microbiol       Date:  1999-12       Impact factor: 4.792

Review 6.  Cellulose hydrolysis by bacteria and fungi.

Authors:  P Tomme; R A Warren; N R Gilkes
Journal:  Adv Microb Physiol       Date:  1995       Impact factor: 3.517

7.  A family IIb xylan-binding domain has a similar secondary structure to a homologous family IIa cellulose-binding domain but different ligand specificity.

Authors:  P J Simpson; D N Bolam; A Cooper; A Ciruela; G P Hazlewood; H J Gilbert; M P Williamson
Journal:  Structure       Date:  1999-07-15       Impact factor: 5.006

8.  Growth of hyperthermophilic archaeon Pyrococcus furiosus on chitin involves two family 18 chitinases.

Authors:  Jun Gao; Michael W Bauer; Keith R Shockley; Marybeth A Pysz; Robert M Kelly
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

9.  Solution structure of a cellulose-binding domain from Cellulomonas fimi by nuclear magnetic resonance spectroscopy.

Authors:  G Y Xu; E Ong; N R Gilkes; D G Kilburn; D R Muhandiram; M Harris-Brandts; J P Carver; L E Kay; T S Harvey
Journal:  Biochemistry       Date:  1995-05-30       Impact factor: 3.162

  9 in total
  4 in total

1.  Crystallization and X-ray diffraction analysis of a catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus.

Authors:  Shouhei Mine; Tsutomu Nakamura; Kunio Hirata; Kazuhiko Ishikawa; Yoshihisa Hagihara; Koichi Uegaki
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-07-25

2.  Analysis of the complete genome sequence of the archaeon Pyrococcus chitonophagus DSM 10152 (formerly Thermococcus chitonophagus).

Authors:  Konstantinos Papadimitriou; Panagiotis K Baharidis; Anastasios Georgoulis; Marion Engel; Maria Louka; Georgia Karamolegkou; Aggeliki Tsoka; Jochen Blom; Bruno Pot; Piotr Malecki; Wojciech Rypniewski; Harald Huber; Michael Schloter; Constantinos Vorgias
Journal:  Extremophiles       Date:  2016-03-25       Impact factor: 2.395

3.  Structure of the catalytic domain of the hyperthermophilic chitinase from Pyrococcus furiosus.

Authors:  Tsutomu Nakamura; Shouhei Mine; Yoshihisa Hagihara; Kazuhiko Ishikawa; Koichi Uegaki
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-12-16

4.  Improvement of the enzymatic activity of the hyperthermophilic cellulase from Pyrococcus horikoshii.

Authors:  Hee-Jin Kang; Koichi Uegaki; Harumi Fukada; Kazuhiko Ishikawa
Journal:  Extremophiles       Date:  2006-10-28       Impact factor: 2.395

  4 in total

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