Literature DB >> 16511055

Purification, crystallization and preliminary X-ray analysis of Enterococcus faecium aminoglycoside-2''-phosphotransferase-Ib [APH(2'')-Ib].

Rupa Walanj1, Paul Young, Heather M Baker, Edward N Baker, Peter Metcalf, Joseph W Chow, Stephen Lerner, Sergei Vakulenko, Clyde A Smith.   

Abstract

Bacterial resistance to the aminoglycoside antibiotics is primarily the result of deactivation of the drugs. Three families of enzymes are responsible for this activity, with one such family being the aminoglycoside phosphotransferases (APHs). The gene encoding one of these enzymes, APH(2'')-Ib, has been cloned and the protein (comprising 299 amino-acid residues) expressed in Escherichia coli, purified and crystallized in the presence of 16%(w/v) PEG 3350 and gentamicin. The crystals belong to the monoclinic space group P2(1), with approximate unit-cell parameters a = 79.7, b = 58.8, c = 81.4 A, beta = 98.4 degrees, and preliminary X-ray diffraction analysis is consistent with the presence of two molecules in the asymmetric unit. Synchrotron diffraction data to approximately 2.65 A resolution were collected from a native APH(2'')-Ib crystal at beamline BL9-2 at SSRL (Stanford, CA, USA). Selenium-substituted crystals have also been produced and structure determination is proceeding.

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Year:  2005        PMID: 16511055      PMCID: PMC1952440          DOI: 10.1107/S174430910500775X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

1.  Structural analyses of nucleotide binding to an aminoglycoside phosphotransferase.

Authors:  D L Burk; W C Hon; A K Leung; A M Berghuis
Journal:  Biochemistry       Date:  2001-07-31       Impact factor: 3.162

2.  Detection of the high-level aminoglycoside resistance gene aph(2")-Ib in Enterococcus faecium.

Authors:  S J Kao; I You; D B Clewell; S M Donabedian; M J Zervos; J Petrin; K J Shaw; J W Chow
Journal:  Antimicrob Agents Chemother       Date:  2000-10       Impact factor: 5.191

3.  The crystal structure of aminoglycoside-3'-phosphotransferase-IIa, an enzyme responsible for antibiotic resistance.

Authors:  Didier Nurizzo; Steven C Shewry; Michael H Perlin; Scott A Brown; Jaydev N Dholakia; Roy L Fuchs; Taru Deva; Edward N Baker; Clyde A Smith
Journal:  J Mol Biol       Date:  2003-03-21       Impact factor: 5.469

Review 4.  Aminoglycoside antibiotic resistance by enzymatic deactivation.

Authors:  Clyde A Smith; Edward N Baker
Journal:  Curr Drug Targets Infect Disord       Date:  2002-06

5.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

6.  Nucleotide sequence analysis of the gene specifying the bifunctional 6'-aminoglycoside acetyltransferase 2"-aminoglycoside phosphotransferase enzyme in Streptococcus faecalis and identification and cloning of gene regions specifying the two activities.

Authors:  J J Ferretti; K S Gilmore; P Courvalin
Journal:  J Bacteriol       Date:  1986-08       Impact factor: 3.490

7.  An automated system to mount cryo-cooled protein crystals on a synchrotron beam line, using compact sample cassettes and a small-scale robot.

Authors:  Aina E Cohen; Paul J Ellis; Mitchell D Miller; Ashley M Deacon; R Paul Phizackerley
Journal:  J Appl Crystallogr       Date:  2002-12       Impact factor: 3.304

8.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

9.  Substrate promiscuity of an aminoglycoside antibiotic resistance enzyme via target mimicry.

Authors:  Desiree H Fong; Albert M Berghuis
Journal:  EMBO J       Date:  2002-05-15       Impact factor: 11.598

Review 10.  Versatility of aminoglycosides and prospects for their future.

Authors:  Sergei B Vakulenko; Shahriar Mobashery
Journal:  Clin Microbiol Rev       Date:  2003-07       Impact factor: 26.132

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  2 in total

1.  The crystal structures of substrate and nucleotide complexes of Enterococcus faecium aminoglycoside-2''-phosphotransferase-IIa [APH(2'')-IIa] provide insights into substrate selectivity in the APH(2'') subfamily.

Authors:  Paul G Young; Rupa Walanj; Vendula Lakshmi; Laura J Byrnes; Peter Metcalf; Edward N Baker; Sergei B Vakulenko; Clyde A Smith
Journal:  J Bacteriol       Date:  2009-05-08       Impact factor: 3.490

2.  The prevalence of aminoglycoside-modifying enzyme and virulence genes among enterococci with high-level aminoglycoside resistance in Inner Mongolia, China.

Authors:  Haiying Niu; Hui Yu; Tangping Hu; Gailin Tian; Lixia Zhang; Xiang Guo; Hai Hu; Zhanli Wang
Journal:  Braz J Microbiol       Date:  2016-04-20       Impact factor: 2.476

  2 in total

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