Literature DB >> 16511051

Cloning, expression, crystallization and preliminary X-ray characterization of cytochrome c552 from a moderate thermophilic bacterium, Hydrogenophilus thermoluteolus.

Shin-ichi Ichiki1, Shota Nakamura, Tadayasu Ohkubo, Yuji Kobayashi, Jun Hasegawa, Susumu Uchiyama, Hirofumi Nishihara, Keiko Mizuta, Yoshihiro Sambongi.   

Abstract

The amino-acid sequence of cytochrome c552 (PH c552) from a moderately thermophilic bacterium, Hydrogenophilus thermoluteolus, was more than 50% identical to that of cytochrome c from an extreme thermophile, Hydrogenobacter thermophilus (HT c552), and from a mesophile, Pseudomonas aeruginosa (PA c551). The PH c552 gene was overexpressed as a correctly processed holoprotein in the Escherichia coli periplasm. The overexpressed PH c552 has been crystallized by vapour diffusion from polyethylene glycol 4000 pH 6.5. The crystals belong to space group C222(1), with unit-cell parameters a = 48.98, b = 57.99, c = 56.20 A. The crystals diffract X-rays to around 2.1 A resolution.

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Year:  2005        PMID: 16511051      PMCID: PMC1952422          DOI: 10.1107/S1744309105007761

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

1.  Stabilization of Pseudomonas aeruginosa cytochrome c(551) by systematic amino acid substitutions based on the structure of thermophilic Hydrogenobacter thermophilus cytochrome c(552).

Authors:  J Hasegawa; H Shimahara; M Mizutani; S Uchiyama; H Arai; M Ishii; Y Kobayashi; S J Ferguson; Y Sambongi; Y Igarashi
Journal:  J Biol Chem       Date:  1999-12-31       Impact factor: 5.157

2.  Selected mutations in a mesophilic cytochrome c confer the stability of a thermophilic counterpart.

Authors:  J Hasegawa; S Uchiyama; Y Tanimoto; M Mizutani; Y Kobayashi; Y Sambongi; Y Igarashi
Journal:  J Biol Chem       Date:  2000-12-01       Impact factor: 5.157

3.  Thermostability of cytochrome c-552 from the thermophilic hydrogen-oxidizing bacterium Hydrogenobacter thermophilus.

Authors:  Y Sanbongi; Y Igarashi; T Kodama
Journal:  Biochemistry       Date:  1989-12-12       Impact factor: 3.162

Review 4.  Cytochrome c from a thermophilic bacterium has provided insights into the mechanisms of protein maturation, folding, and stability.

Authors:  Yoshihiro Sambongi; Susumu Uchiyama; Yuji Kobayashi; Yasuo Igarashi; Jun Hasegawa
Journal:  Eur J Biochem       Date:  2002-07

5.  Thermostability of Pseudomonas hydrogenothermophila cytochrome c-552.

Authors:  Y Sambongi; S Y Chung; K Yokoyama; Y Igarashi; T Kodama
Journal:  Biosci Biotechnol Biochem       Date:  1992-06       Impact factor: 2.043

6.  Five amino acid residues responsible for the high stability of Hydrogenobacter thermophilus cytochrome c552: reciprocal mutation analysis.

Authors:  Kenta Oikawa; Shota Nakamura; Takafumi Sonoyama; Atsushi Ohshima; Yuji Kobayashi; Shin-ichi J Takayama; Yasuhiko Yamamoto; Susumu Uchiyama; Jun Hasegawa; Yoshihiro Sambongi
Journal:  J Biol Chem       Date:  2004-12-14       Impact factor: 5.157

7.  [19] Diffraction-data processing for electronic detectors: Theory and practice.

Authors:  James W Pflugrath
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

8.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

9.  Amino acid sequence of cytochrome c-552 from a thermophilic hydrogen-oxidizing bacterium, Hydrogenobacter thermophilus.

Authors:  Y Sanbongi; M Ishii; Y Igarashi; T Kodama
Journal:  J Bacteriol       Date:  1989-01       Impact factor: 3.490

10.  Thermodynamic characterization of variants of mesophilic cytochrome c and its thermophilic counterpart.

Authors:  Susumu Uchiyama; Jun Hasegawa; Yuko Tanimoto; Hiroshi Moriguchi; Masayuki Mizutani; Yasuo Igarashi; Yoshihiro Sambongi; Yuji Kobayashi
Journal:  Protein Eng       Date:  2002-06
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