| Literature DB >> 16503983 |
Abstract
BACKGROUND: This paper describes a quantitative analysis of the cyst lining architecture in radicular cysts (of inflammatory aetiology) and odontogenic keratocysts (thought to be developmental or neoplastic) including its 2 counterparts: solitary and associated with the Basal Cell Naevus Syndrome (BCNS).Entities:
Year: 2006 PMID: 16503983 PMCID: PMC1386655 DOI: 10.1186/1746-160X-2-4
Source DB: PubMed Journal: Head Face Med ISSN: 1746-160X Impact factor: 2.151
Figure 1The sequence of procedures to segment the epithelial tissue space into theoretical cell profiles. a) original, b) optical density of the Haematoxylin stain after colour deconvolution. c) the epithelial compartment, d) a smoothed version b) after 4 passes of an averaging filter of kernel size 5 pixels, e) morphological basins, f) catchment basins (theoretical cell profiles) after applying the watershed transform, g) average of the negative of e) and f) to show that each "morphological basin" determines a "catchment basin" area. h) logical AND operation of f) and a) to visualise the result of the segmentation. Image i) shows the layers of the tissue labelled as RGB triplets intensity according to their distance from 3 different references (basal layer (red), superficial layer (green) and both layers (blue)).
Figure 2Two examples of the theoretical cell segmentation process. From top to bottom: a) a solitary odontogenic keratocyst lining with b) its cell segmentation image, c) a radicular cyst lining and d) its cell segmentation image. Note the palisading in the keratocyst and the variable epithelial thickness of the radicular cyst.
Morphometrical parameters used in the analysis of the theoretical cells.
| Perim | pixels | Perimeter calculated from the centres of the boundary pixels |
| Area | pixels2 | The area inside the polygon defined by the perimeter |
| MinR | pixels | Radius of the inscribed circle centred at the centre of mass |
| MaxR | pixels | Radius of the enclosing circle centred at the centre of mass |
| Feret | pixels | Largest axis length |
| Breadth | pixels | The largest axis perpendicular to the Feret diameter |
| CHull | pixels | Convex Hull or convex polygon calculated from pixel centres |
| CArea | pixels2 | Area of the Convex Hull polygon |
| MBCRadius | pixels | Radius of the Minimal Bounding Circle |
| AspRatio | none | Aspect Ratio = Feret/Breadth |
| Circ | none | Circularity = 4*π*Area/Perimeter2, also called form factor |
| Roundness | none | Roundness = 4*Area/(π*Feret2) |
| AreaEquivD | pixels | Area of circle with equivalent diameter = sqrt((4/π)*Area) |
| PerimEquivD | none | Perimeter of circle with equivalent diameter = Area/π |
| EquivEllipseAr | pixels2 | Equivalent Ellipse Area = (π*Feret*Breadth)/4 |
| Compactness | none | Compactness: sqrt((4/π)*Area)/Feret |
| Solidity | none | Solidity = Area/Convex_Area |
| Concavity | pixels2 | Concavity = Convex_Area - Area |
| Convexity | none | Convexity = Convex_Hull/Perimeter |
| Shape | none | Shape = Perimeter2/Area |
| RFactor | none | RFactor = Convex_Hull/(Feret*π) |
| ModRatio | none | Modification Ratio = (2*MinR)/Feret |
| Sphericity | none | Sphericity = MinR/MaxR |
| ArBBox | pixels2 | ArBBox = Feret*Breadth, area of the box along Feret diameter |
| Rectang | none | Rectangularity = Area/ArBBox |
Here, the "pixel" units relate to length (the distance between the centre of one pixel and its neighbour), while pixels2 relate to area (the number of pixels). "None" are dimensionless values.
Mean morphometrical parameter values in the three cyst types and their pairwise comparisons.
| Perim | 100.5313 (± 26.4673) | 103.2415 (± 27.1678) | 108.1265 (± 34.1349) |
| Area | 553.1672 (± 295.9194) | 583.5653 (± 302.4889) | 641.1525 (± 424.4672) |
| MinR | 8.3662 (± 2.8550) | ||
| MaxR | 19.5292 (± 5.3661) | 20.0227 (± 5.5363) | 21.1478 (± 6.8432) |
| Feret | 36.4066 (± 9.9051) | 37.2535 (± 10.1607) | 39.2035 (± 12.4571) |
| Breadth | 25.1631 (± 7.3007) | 25.9255 (± 7.3639) | 26.6557 (± 8.9150) |
| CHull | 95.1866 (± 24.3340) | 97.6547 (± 24.9523) | 102.1490 (± 31.1970) |
| CArea | 612.2418 (± 329.0827) | 646.1540 (± 336.4255) | 724.8820 (± 486.0023) |
| MBCRadius | 18.3400 (± 4.9405) | 18.7778 (± 5.0672) | 19.7536 (± 6.2371) |
| AspRatio | 1.5057 (± 0.4076) | 1.4883 (± 0.3963) | 1.5276 (± 0.4122) |
| Circ | 0.6411 (± 0.0988) | ||
| Roundness | 0.5143 (± 0.1187) | 0.5196 (± 0.1171) | 0.5031 (± 0.1166) |
| AreaEquivD | 25.6956 (± 6.6373) | 26.4050 (± 6.7678) | 27.3257 (± 8.3459) |
| PerimEquivD | 32.0001 (± 8.4248) | 32.8628 (± 8.6478) | 34.4177 (± 10.8655) |
| EquivEllipseAr | 756.3853 (± 401.9763) | 797.0583 (± 413.0425) | 884.5156 (± 583.8462) |
| Compactness | 0.7120 (± 0.0859) | 0.7158 (± 0.0846) | 0.7042 (± 0.0853) |
| Solidity | 0.9034 (± 0.0520) | 0.9037 (± 0.0516) | 0.8877 (± 0.0600) |
| Concavity | 59.0746 (± 53.9079) | 62.5887 (± 54.9009) | 83.7295 (± 88.4315) |
| Convexity | 0.9485 (± 0.0172) | ||
| Shape | 20.1933 (± 4.0637) | ||
| RFactor | 0.8365 (± 0.0546) | 0.8391 (± 0.0545) | 0.8337 (± 0.0553) |
| ModRatio | 0.4699 (± 0.1315) | 0.4748 (± 0.1299) | 0.4523 (± 0.0131) |
| Sphericity | 0.4393 (± 0.1264) | 0.4430 (± 0.1247) | 0.4210 (± 0.1256) |
| ArBBox | 963.0597 (± 511.8121) | 1014.8461 (± 525.9020) | 1126.2003 (± 743.3760) |
| Rectang | 0.5723 (± 0.0675) |
OK: odontogenic keratocyst, BCNS: basal cell naevus syndrome, SD: standard deviation from the mean.
N = 27,806. Mean values across columns are statistically different, except for those in the (General Linear Model with post-hoc Tukey, p < 0.05)
Figure 3Layer-wise cell discrimination across the 3 types of cysts. The discrimination rates remain relatively consistent across layers. The largest discrimination is achieved between the (pooled) keratocysts and radicular cyst categories. OK: solitary odontogenic keratocysts, Radicular: radicular cysts, BCNS OK: Basal cell naevus syndrome keratocysts, OKs: keratocysts (pooled, solitary+syndrome), 3 groups: discrimination into any of the three groups (OK vs. BCNS OK vs.Radicular).
Figure 4Distribution of angles of the major axis length of cells with respect to the layer orientation at the various layers of the cystic epithelial lining.K: solitary odontogenic keratocysts, S: basal cell naevus syndrome associated odontogenic keratocysts, R: radicular cysts. Note the differences in the distribution of layer 1 (the basal cell layer) across the keratocysts and radicular cysts and the tendency of radicular cysts to have more layers.