Literature DB >> 16491340

Metabolic versatility of haloalkaliphilic bacteria from soda lakes belonging to the Alkalispirillum-Alkalilimnicola group.

Dimitry Y Sorokin1, Tatjana N Zhilina, Anatoly M Lysenko, Tatjana P Tourova, Elizaveta M Spiridonova.   

Abstract

Four new isolates were obtained from denitrifying enrichments with various electron donors using sediment samples from hypersaline soda lakes. Based on 16S rRNA gene analysis and DNA-DNA hybridization results, they were all identified as members of the Gammaproteobacteria closely associated with the Alkalispirillum-Alkalilimnicola group. Two isolates were obtained from samples enriched with nitrate as electron acceptor and H2 or polysulfide as electron donors, and another two strains were obtained with N2O as the electron acceptor and sulfide or acetate as electron donors. All four new isolates, together with the type strains of the genera Alkalispirillum and Alkalilimnicola originally described as obligate aerobes, were capable of anaerobic growth with acetate using either nitrate or N2O as electron acceptors. Their denitrification pathway, however, was disrupted at the level of nitrite. RuBisCO form I gene was detected and sequenced in the new isolates and in Alkalilimnicola halodurans but not in Alkalispirillum mobile. These data, together with the evidence of Oremland et al. (Appl Environ Microbiol 68:4795-4802, 2002) on the potential of Alkalilimnicola sp. MLHE-1 for autotrophic growth with arsenite as electron donor and nitrate as electron acceptor, demonstrate much higher metabolic diversity of this specific group of haloalkaliphilic Gammaproteobacteria than was originally anticipated.

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Year:  2006        PMID: 16491340     DOI: 10.1007/s00792-005-0487-7

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  13 in total

1.  Alcalilimnicola halodurans gen. nov., sp. nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley.

Authors:  M M Yakimov; L Giuliano; T N Chernikova; G Gentile; W R Abraham; H Lünsdorf; K N Timmis; P N Golyshin
Journal:  Int J Syst Evol Microbiol       Date:  2001-11       Impact factor: 2.747

2.  [An oligonucleotide primer system for amplification of the ribulose-1,5-bisphosphate carboxylase/oxygenase genes of bacteria of various taxonomic groups].

Authors:  E M Spiridonova; I A Berg; T V Kolganova; R N Ivanovskiĭ; B B Kuznetsov; T P Turova
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3.  Diversity of Kenyan soda lake alkaliphiles assessed by molecular methods.

Authors:  Helen C Rees; William D Grant; Brian E Jones; Shaun Heaphy
Journal:  Extremophiles       Date:  2003-10-29       Impact factor: 2.395

Review 4.  Chemolithotrophic haloalkaliphiles from soda lakes.

Authors:  Dimitry Yu Sorokin; Johannes Gijs Kuenen
Journal:  FEMS Microbiol Ecol       Date:  2005-05-01       Impact factor: 4.194

5.  Alkalispirillum mobile gen. nov., spec. nov., an alkaliphilic non-phototrophic member of the Ectothiorhodospiraceae.

Authors:  M J Rijkenberg; R Kort; K J Hellingwerf
Journal:  Arch Microbiol       Date:  2001-05       Impact factor: 2.552

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Journal:  Comput Appl Biosci       Date:  1994-09

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Review 8.  Microbial diversity of soda lakes.

Authors:  B E Jones; W D Grant; A W Duckworth; G G Owenson
Journal:  Extremophiles       Date:  1998-08       Impact factor: 2.395

9.  Growth kinetics of haloalkaliphilic, sulfur-oxidizing bacterium Thioalkalivibrio versutus strain ALJ 15 in continuous culture.

Authors:  Horia Banciu; Dimitry Y Sorokin; Robbert Kleerebezem; Gerard Muyzer; Erwin A Galinski; J Gijs Kuenen
Journal:  Extremophiles       Date:  2004-02-26       Impact factor: 2.395

10.  Distribution of RuBisCO genotypes along a redox gradient in Mono Lake, California.

Authors:  Bruno J Giri; Nasreen Bano; James T Hollibaugh
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

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  11 in total

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Authors:  Rocio J Alcántara-Hernández; César Valenzuela-Encinas; Rodolfo Marsch; Luc Dendooven
Journal:  Extremophiles       Date:  2008-12-03       Impact factor: 2.395

2.  Desulfonatronum zhilinae sp. nov., a novel haloalkaliphilic sulfate-reducing bacterium from soda Lake Alginskoe, Trans-Baikal Region, Russia.

Authors:  Anastasiya G Zakharyuk; Ludmila P Kozyreva; Tatyana V Khijniak; Bair B Namsaraev; Victoria A Shcherbakova
Journal:  Extremophiles       Date:  2015-04-05       Impact factor: 2.395

Review 3.  F1F0-ATP synthases of alkaliphilic bacteria: lessons from their adaptations.

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Review 6.  Microbial diversity and biogeochemical cycling in soda lakes.

Authors:  Dimitry Y Sorokin; Tom Berben; Emily Denise Melton; Lex Overmars; Charlotte D Vavourakis; Gerard Muyzer
Journal:  Extremophiles       Date:  2014-08-26       Impact factor: 2.395

Review 7.  Living at the Frontiers of Life: Extremophiles in Chile and Their Potential for Bioremediation.

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8.  Increasing the Selectivity for Sulfur Formation in Biological Gas Desulfurization.

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Journal:  Environ Sci Technol       Date:  2019-04-04       Impact factor: 9.028

9.  Aerobic Denitrification and Heterotrophic Sulfur Oxidation in the Genus Halomonas Revealed by Six Novel Species Characterizations and Genome-Based Analysis.

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10.  Heterotrophic denitrification at extremely high salt and pH by haloalkaliphilic Gammaproteobacteria from hypersaline soda lakes.

Authors:  A A Shapovalova; T V Khijniak; T P Tourova; G Muyzer; D Y Sorokin
Journal:  Extremophiles       Date:  2008-05-02       Impact factor: 2.395

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