| Literature DB >> 16486209 |
Lixin Zhan1, Jeff Z Y Chen, Wing-Ki Liu.
Abstract
We propose a global optimization procedure, basin paving, which is based on the combination of the optimization strategies behind basin hopping and energy landscape paving. As an example, we describe its application in the protein structure prediction by examining two well-studied peptides, where we have found lower potential energy minima than previously located. We also compare the statistics of the searching trajectories produced by basin paving, basin hopping, and energy landscape paving.Year: 2006 PMID: 16486209 DOI: 10.1103/PhysRevE.73.015701
Source DB: PubMed Journal: Phys Rev E Stat Nonlin Soft Matter Phys ISSN: 1539-3755