Literature DB >> 16467899

Structure of cationized glycine, gly.m (m = be, mg, ca, sr, ba), in the gas phase: intrinsic effect of cation size on zwitterion stability.

E F Strittmatter1, A S Lemoff, E R Williams.   

Abstract

Interactions between divalent metal ions and biomolecules are common both in solution and in the gas phase. Here, the intrinsic effect of divalent alkaline earth metal ions (Be, Mg, Ca, Sr, Ba) on the structure of glycine in the absence of solvent is examined. Results from both density functional and Moller-Plesset theories indicate that for all metal ions except beryllium, the salt-bridge form of the ion, in which glycine is a zwitterion, is between 5 and 12 kcal/mol more stable than the charge-solvated structure in which glycine is in its neutral form. For beryllium, the charge-solvated structure is 5-8 kcal/mol more stable than the salt-bridge structure. Thus, there is a dramatic change in the structure of glycine with increased metal cation size. Using a Hartree-Fock-based partitioning method, the interaction between the metal ion and glycine is separated into electrostatic, charge transfer and deformation components. The charge transfer interactions are more important for stabilizing the charge-solvated structure of glycine with beryllium relative to magnesium. In contrast, the difference in stability between the charge-solvated and salt-bridge structure for magnesium is mostly due to electrostatic interactions that favor formation of the salt-bridge structure. These results indicate that divalent metal ions dramatically influence the structure of this simplest amino acid in the gas phase.

Entities:  

Year:  2000        PMID: 16467899      PMCID: PMC1343513          DOI: 10.1021/jp002970e

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  6 in total

Review 1.  Peptides and the origin of life.

Authors:  B M Rode
Journal:  Peptides       Date:  1999       Impact factor: 3.750

2.  Structures of protonated arginine dimer and bradykinin investigated by density functional theory: further support for stable gas-phase salt bridges.

Authors:  E F Strittmatter; E R Williams
Journal:  J Phys Chem A       Date:  2000-06-29       Impact factor: 2.781

3.  Is arginine a zwitterion in the gas phase?

Authors:  W D Price; R A Jockusch; E R Williams
Journal:  J Am Chem Soc       Date:  1997-12-10       Impact factor: 15.419

4.  Tandem mass spectrometry of large biomolecule ions by blackbody infrared radiative dissociation.

Authors:  W D Price; P D Schnier; E R Williams
Journal:  Anal Chem       Date:  1996-03-01       Impact factor: 6.986

5.  Unimolecular reactions of dihydrated alkaline earth metal dications M2+(H2O)2, M = Be, Mg, Ca, Sr, and Ba: salt-bridge mechanism in the proton-transfer reaction M2+(H2O)2 --> MOH+ + H3O.

Authors:  M Beyer; E R Williams; V E Bondybey
Journal:  J Am Chem Soc       Date:  1999-02-24       Impact factor: 15.419

6.  Structure of cationized arginine (arg.m, m = h, li, na, k, rb, and cs) in the gas phase: further evidence for zwitterionic arginine.

Authors:  R A Jockusch; W D Price; E R Williams
Journal:  J Phys Chem A       Date:  1999-11-18       Impact factor: 2.781

  6 in total
  5 in total

1.  N-Protonated isomers as gateways to peptide ion fragmentation.

Authors:  Fredrik Haeffner; John K Merle; Karl K Irikura
Journal:  J Am Soc Mass Spectrom       Date:  2011-09-24       Impact factor: 3.109

2.  Infrared spectroscopy of cationized arginine in the gas phase: direct evidence for the transition from nonzwitterionic to zwitterionic structure.

Authors:  Matthew F Bush; Jeremy T O'Brien; James S Prell; Richard J Saykally; Evan R Williams
Journal:  J Am Chem Soc       Date:  2007-01-24       Impact factor: 15.419

3.  Divalent metal ion-peptide interactions probed by electron capture dissociation of trications.

Authors:  Haichuan Liu; Kristina Håkansson
Journal:  J Am Soc Mass Spectrom       Date:  2006-09-06       Impact factor: 3.109

4.  Binding energies of water to lithiated valine: formation of solution-phase structure in vacuo.

Authors:  Andrew S Lemoff; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2004-07       Impact factor: 3.109

5.  Characterization of phosphate-containing metabolites by calcium adduction and electron capture dissociation.

Authors:  Haichuan Liu; Hyun Ju Yoo; Kristina Håkansson
Journal:  J Am Soc Mass Spectrom       Date:  2008-03-22       Impact factor: 3.109

  5 in total

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