Literature DB >> 16464109

A reversible pH-driven DNA nanoswitch array.

Dongsheng Liu1, Andreas Bruckbauer, Chris Abell, Shankar Balasubramanian, Dae-Joon Kang, David Klenerman, Dejian Zhou.   

Abstract

An array of surface-immobilized proton-fueled DNA nanomachines is reversibly actuated by cycling of the solution pH between 4.5 and 9, producing a conformational change between a four-stranded and a double-stranded structure, which elongates or shortens the separation distance between the 5' and 3' end of the DNA. By labeling the DNA 3' end with a fluorophore and immobilizing it onto a thin-gold surface through its 5' thiol modification, the nanoscale motion of the DNA produces mechanical work to lift up and bring down the fluorophore from the gold surface by at least 2.5 nm and transduces this motion into an optical "on-and-off" nanoswitch.

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Year:  2006        PMID: 16464109     DOI: 10.1021/ja0568300

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  25 in total

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Authors:  Sundus Erbas-Cakmak; David A Leigh; Charlie T McTernan; Alina L Nussbaumer
Journal:  Chem Rev       Date:  2015-09-08       Impact factor: 60.622

2.  Programmable motion of DNA origami mechanisms.

Authors:  Alexander E Marras; Lifeng Zhou; Hai-Jun Su; Carlos E Castro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-05       Impact factor: 11.205

3.  In Vitro Selection of pH-Activated DNA Nanostructures.

Authors:  Faye Yi Fong; Seung Soo Oh; Craig J Hawker; H Tom Soh
Journal:  Angew Chem Int Ed Engl       Date:  2016-11-03       Impact factor: 15.336

4.  Single molecule force spectroscopy on G-quadruplex DNA.

Authors:  Susanna Lynch; Heather Baker; Sarah G Byker; Dejian Zhou; Kumar Sinniah
Journal:  Chemistry       Date:  2009-08-17       Impact factor: 5.236

5.  Dimerization and oligomerization of DNA-assembled building blocks for controlled multi-motion in high-order architectures.

Authors:  Ling Xin; Xiaoyang Duan; Na Liu
Journal:  Nat Commun       Date:  2021-05-28       Impact factor: 14.919

6.  Alternating-electric-field-enhanced reversible switching of DNA nanocontainers with pH.

Authors:  Youdong Mao; Dongsheng Liu; Shutao Wang; Songnian Luo; Wenxing Wang; Yanlian Yang; Qi Ouyang; Lei Jiang
Journal:  Nucleic Acids Res       Date:  2007-01-30       Impact factor: 16.971

7.  Spectroscopic characterization of i-motif forming c-myc derived sequences double-labeled with pyrene.

Authors:  Anna Dembska; Patrycja Rzepecka; Bernard Juskowiak
Journal:  J Fluoresc       Date:  2013-03-22       Impact factor: 2.217

8.  pH induced reversible assembly of DNA wrapped carbon nanotubes.

Authors:  Ying Wan; Gang Liu; Xinhua Zhu; Yan Su
Journal:  Chem Cent J       Date:  2013-01-24       Impact factor: 4.215

9.  Molecular motions in functional self-assembled nanostructures.

Authors:  Alexandre Dhotel; Ziguang Chen; Laurent Delbreilh; Boulos Youssef; Jean-Marc Saiter; Li Tan
Journal:  Int J Mol Sci       Date:  2013-01-24       Impact factor: 5.923

Review 10.  DNA Assembly-Based Stimuli-Responsive Systems.

Authors:  Shasha Lu; Jianlei Shen; Chunhai Fan; Qian Li; Xiurong Yang
Journal:  Adv Sci (Weinh)       Date:  2021-05-14       Impact factor: 16.806

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