Literature DB >> 16462038

Identification of medicinal Atractylodes based on ITS sequences of nrDNA.

Mao Shiba1, Kenji Kondo, Eiji Miki, Hiroki Yamaji, Takashi Morota, Susumu Terabayashi, Shuichi Takeda, Hiroshi Sasaki, Ken-ichi Miyamoto, Masaki Aburada.   

Abstract

Dried rhizomes of five species of Atractylodes (A. japonica, A. macrocephala, A. lancea, A. chinensis, and A. koreana), Compositae, have been used as crude drugs mainly for the treatment of stomach disorders and for their diuretic properties in Chinese and Japanese traditional medicines. The identification of the botanical origins of these crude drugs is generally difficult from their morphological and chemical features only. In this study, for identification with more reliable, nuclear ribosomal DNA (nrDNA), internal transcribed spacer (ITS) regions of five species of medicinal Atractylodes were sequenced. As a result, specific ITS genotypes were recognized by each species. The four species (A. japonica, A. macrocephala, A. lancea, and A. chinensis) prescribed in Chinese and Japanese Pharmacopoeias as botanical origins of crude Atractylodes drugs could be distinguished by their ITS sequences because they had difference genotypes on the ITS sequences. However, the genotype of A. koreana was the same as that of A. chinensis. Additionally, hybrids between A. lancea and A. chinensis were also recognized as nucleotide additives on their ITS sequences. In this study, several morphological characteristics were researched by their genotype, too. As this result, the hybrids recognized from the genetic analysis had intermediate morphological characteristics between A. lancea and A. chinensis. It was also recognized that A. lancea and A. chinensis except for their hybrids were significant differences. It is therefore suggested that ITS sequences of nrDNA would be useful for the identification of the crude drugs derived from Atractylodes species and their interspecific hybridizations.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16462038     DOI: 10.1248/bpb.29.315

Source DB:  PubMed          Journal:  Biol Pharm Bull        ISSN: 0918-6158            Impact factor:   2.233


  13 in total

Review 1.  The changing epitome of species identification - DNA barcoding.

Authors:  M Ajmal Ali; Gábor Gyulai; Norbert Hidvégi; Balázs Kerti; Fahad M A Al Hemaid; Arun K Pandey; Joongku Lee
Journal:  Saudi J Biol Sci       Date:  2014-03-31       Impact factor: 4.219

2.  An overlooked dispersal route of Cardueae (Asteraceae) from the Mediterranean to East Asia revealed by phylogenomic and biogeographical analyses of Atractylodes.

Authors:  Maoqin Xia; Minqi Cai; Hans Peter Comes; Li Zheng; Tetsuo Ohi-Toma; Joongku Lee; Zhechen Qi; Kamil Konowalik; Pan Li; Kenneth M Cameron; Chengxin Fu
Journal:  Ann Bot       Date:  2022-07-19       Impact factor: 5.040

3.  Morphological and Molecular Analyses of the Interaction between Rosa multiflora and Podosphaera pannosa.

Authors:  Ying Bao; Xue Zhang; Xiaoxiang Sun; Manzhu Bao; Yuanyuan Wang
Journal:  Genes (Basel)       Date:  2022-06-02       Impact factor: 4.141

4.  Chemical Differentiation of Genetically Identified Atractylodes japonica, A. macrocephala, and A. chinensis Rhizomes Using High-Performance Liquid Chromatography with Chemometric Analysis.

Authors:  Jung-Hoon Kim; Eui-Jeong Doh; Guemsan Lee
Journal:  Evid Based Complement Alternat Med       Date:  2018-08-02       Impact factor: 2.629

5.  Genetic and environmental factors influencing the contents of essential oil compounds in Atractylodes lancea.

Authors:  Takahiro Tsusaka; Bunsho Makino; Ryo Ohsawa; Hiroshi Ezura
Journal:  PLoS One       Date:  2019-05-28       Impact factor: 3.240

6.  Evaluation of heritability of β-eudesmol/hinesol content ratio in Atractylodes lancea De Candolle.

Authors:  Takahiro Tsusaka; Bunsho Makino; Ryo Ohsawa; Hiroshi Ezura
Journal:  Hereditas       Date:  2020-03-11       Impact factor: 3.271

7.  Isolation and characterization of polymorphic microsatellite markers from the Chinese medicinal herb Atractylodes macrocephala (Asteraceae).

Authors:  Li Zheng; Zhong-Da Shao; Zong-Chao Wang; Cheng-Xin Fu
Journal:  Int J Mol Sci       Date:  2012-11-28       Impact factor: 5.923

8.  Molecular systematics of Genus Atractylodes (Compositae, Cardueae): evidence from Internal Transcribed Spacer (ITS) and trnL-F sequences.

Authors:  Hua-Sheng Peng; Qing-Jun Yuan; Qian-Quan Li; Lu-Qi Huang
Journal:  Int J Mol Sci       Date:  2012-11-09       Impact factor: 5.923

9.  Evaluation of Medicinal Categorization of Atractylodes japonica Koidz. by Using Internal Transcribed Spacer Sequencing Analysis and HPLC Fingerprinting Combined with Statistical Tools.

Authors:  Jung-Hoon Kim; Eui-Jeong Doh; Guemsan Lee
Journal:  Evid Based Complement Alternat Med       Date:  2016-04-12       Impact factor: 2.629

10.  A new method based on SNP of nrDNA-ITS to identify Saccharum spontaneum and its progeny in the genus Saccharum.

Authors:  Shan Yang; Xueting Li; Fei Huang; Yongji Huang; Xinlong Liu; Jiayun Wu; Qinnan Wang; Zuhu Deng; Rukai Chen; Muqing Zhang
Journal:  PLoS One       Date:  2018-05-16       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.