Literature DB >> 16461398

Dynamical determinants of drug-inducible gene expression in a single bacterium.

Thuc T Le1, Thierry Emonet, Sebastien Harlepp, Calin C Guet, Philippe Cluzel.   

Abstract

A primitive example of adaptation in gene expression is the balance between the rate of synthesis and degradation of cellular RNA, which allows rapid responses to environmental signals. Here, we investigate how multidrug efflux pump systems mediate the dynamics of a simple drug-inducible system in response to a steady level of inducer. Using fluorescence correlation spectroscopy, we measured in real time within a single bacterium the transcription activity at the RNA level of the acrAB-TolC multidrug efflux pump system. When cells are exposed to constant level of anhydrotetracycline inducer and are adsorbed onto a poly-L-lysine-coated surface, we found that the acrAB-TolC promoter is steadily active. We also monitored the activity of the tet promoter to characterize the effect of this efflux system on the dynamics of drug-inducible transcription. We found that the transcriptional response of the tet promoter to a steady level of aTc rises and then falls back to its preinduction level. The rate of RNA degradation was constant throughout the transcriptional pulse, indicating that the modulation of intracellular inducer concentration alone can produce this pulsating response. Single-cell experiments together with numerical simulations suggest that such pulsating response in drug-inducible genetic systems is a property emerging from the dependence of drug-inducible transcription on multidrug efflux systems.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16461398      PMCID: PMC1432126          DOI: 10.1529/biophysj.105.073353

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  35 in total

Review 1.  Messenger RNA stability and its role in control of gene expression in bacteria and phages.

Authors:  M Grunberg-Manago
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

2.  The quiescent-cell expression system for protein synthesis in Escherichia coli.

Authors:  D C Rowe; D K Summers
Journal:  Appl Environ Microbiol       Date:  1999-06       Impact factor: 4.792

3.  Structural basis of multiple drug-binding capacity of the AcrB multidrug efflux pump.

Authors:  Edward W Yu; Gerry McDermott; Helen I Zgurskaya; Hiroshi Nikaido; Daniel E Koshland
Journal:  Science       Date:  2003-05-09       Impact factor: 47.728

4.  Real-time RNA profiling within a single bacterium.

Authors:  Thuc T Le; Sébastien Harlepp; Calin C Guet; Kimberly Dittmar; Thierry Emonet; Tao Pan; Philippe Cluzel
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-20       Impact factor: 11.205

5.  Periodicity of cell attachment patterns during Escherichia coli biofilm development.

Authors:  Konstantin Agladze; Debra Jackson; Tony Romeo
Journal:  J Bacteriol       Date:  2003-09       Impact factor: 3.490

Review 6.  Evolvability.

Authors:  M Kirschner; J Gerhart
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-21       Impact factor: 11.205

7.  Thermodynamic analysis of tetracycline-mediated induction of Tet repressor by a quantitative methylation protection assay.

Authors:  T Lederer; M Takahashi; W Hillen
Journal:  Anal Biochem       Date:  1995-12-10       Impact factor: 3.365

8.  The local repressor AcrR plays a modulating role in the regulation of acrAB genes of Escherichia coli by global stress signals.

Authors:  D Ma; M Alberti; C Lynch; H Nikaido; J E Hearst
Journal:  Mol Microbiol       Date:  1996-01       Impact factor: 3.501

9.  Genes acrA and acrB encode a stress-induced efflux system of Escherichia coli.

Authors:  D Ma; D N Cook; M Alberti; N G Pon; H Nikaido; J E Hearst
Journal:  Mol Microbiol       Date:  1995-04       Impact factor: 3.501

10.  Role of outer membrane barrier in efflux-mediated tetracycline resistance of Escherichia coli.

Authors:  D G Thanassi; G S Suh; H Nikaido
Journal:  J Bacteriol       Date:  1995-02       Impact factor: 3.490

View more
  6 in total

1.  Single-cell protein induction dynamics reveals a period of vulnerability to antibiotics in persister bacteria.

Authors:  Orit Gefen; Chana Gabay; Michael Mumcuoglu; Giora Engel; Nathalie Q Balaban
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-21       Impact factor: 11.205

2.  Regulatory Dynamics Determine Cell Fate following Abrupt Antibiotic Exposure.

Authors:  Daniel Schultz; Adam C Palmer; Roy Kishony
Journal:  Cell Syst       Date:  2017-11-01       Impact factor: 10.304

3.  Trade-offs between drug toxicity and benefit in the multi-antibiotic resistance system underlie optimal growth of E. coli.

Authors:  Kevin B Wood; Philippe Cluzel
Journal:  BMC Syst Biol       Date:  2012-05-25

4.  Nutrient Gradients Mediate Complex Colony-Level Antibiotic Responses in Structured Microbial Populations.

Authors:  Mirjana Stevanovic; Thomas Boukéké-Lesplulier; Lukas Hupe; Jeff Hasty; Philip Bittihn; Daniel Schultz
Journal:  Front Microbiol       Date:  2022-04-27       Impact factor: 5.640

5.  Delay-induced transient increase and heterogeneity in gene expression in negatively auto-regulated gene circuits.

Authors:  R Maithreye; Ram Rup Sarkar; Veena K Parnaik; Somdatta Sinha
Journal:  PLoS One       Date:  2008-08-13       Impact factor: 3.240

6.  Minimally invasive determination of mRNA concentration in single living bacteria.

Authors:  Călin C Guet; Luke Bruneaux; Taejin L Min; Dan Siegal-Gaskins; Israel Figueroa; Thierry Emonet; Philippe Cluzel
Journal:  Nucleic Acids Res       Date:  2008-05-30       Impact factor: 16.971

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.