Literature DB >> 16461000

Fully automated quantitation of hepatitis B virus (HBV) DNA in human plasma by the COBAS AmpliPrep/COBAS TaqMan system.

S Hochberger1, D Althof, R Gallegos de Schrott, N Nachbaur, H Röck, H Leying.   

Abstract

BACKGROUND: The measurement of HBV DNA levels has become the most direct and reliable method used for accurate diagnosis and prognosis of acute and chronic HBV infection []. Nucleic acid amplification testing (NAT detection) also reduces the pre-seroconversion window period. The method can be used to aid in the management of HBV infection, by the identification of individuals with high levels of viral replication who might benefit from antiviral therapy, monitoring patients on therapy, and identification of the development of resistance.
OBJECTIVES: Evaluation of the novel COBAS AmpliPrep/COBAS TaqMan HBV Test, which combines automated extraction of DNA on the COBAS AmpliPrep Instrument (CAP), coupled with real-time PCR on the COBAS TaqMan Analyzer (CTM), thus greatly reducing hands-on time during sample preparation and amplification/detection. The assay fulfils the current requirements: a highly sensitive HBV DNA detection reagent which is calibrated to the International WHO Standard to reliably quantify HBV genotypes A-G in plasma with a very broad measuring range, thereby minimizing laborious repeat testing. STUDY
DESIGN: The test was evaluated for sensitivity, dynamic range, precision, clinical and analytical specificity, genotype inclusivity, interfering substances, and correlation with other tests for the detection of HBV DNA (COBAS Amplicor HBV Monitor Test, COBAS TaqMan HBV Test for Use with the High Pure System and VERSANT HBV DNA 3.0 Assay). RESULTS AND
CONCLUSION: A fully automated system for sample preparation, amplification and quantitation of HBV DNA was developed that demonstrates a nearly 7-log dynamic range up to 1.1E+08IU/mL, an assay sensitivity (95% hit-rate) of 4-12IU/mL and an equivalent detection of genotypes A-G plus a prevalent pre-core mutant. The results obtained with the new test show a good correlation to titers obtained with other platforms.

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Year:  2006        PMID: 16461000     DOI: 10.1016/j.jcv.2006.01.003

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  15 in total

1.  Review.

Authors:  Usman Khokhar; Debra Stevens; Linda K Shipton; Daryl T-Y Lau
Journal:  Gastroenterol Hepatol (N Y)       Date:  2007-09

2.  COBAS AmpliPrep-COBAS TaqMan hepatitis B virus (HBV) test: a novel automated real-time PCR assay for quantification of HBV DNA in plasma.

Authors:  Tiziano Allice; Francesco Cerutti; Fabrizia Pittaluga; Silvia Varetto; Silvia Gabella; Alfredo Marzano; Alessandro Franchello; Giuseppe Colucci; Valeria Ghisetti
Journal:  J Clin Microbiol       Date:  2007-01-17       Impact factor: 5.948

3.  Comparison of three Roche hepatitis B virus viral load assay formats.

Authors:  Michael T Pyne; Lauren Vest; Jennifer Clement; Jessica Lee; Jessica R Rosvall; Kevin Luk; Michael Rossi; Bryan Cobb; David R Hillyard
Journal:  J Clin Microbiol       Date:  2012-04-25       Impact factor: 5.948

4.  Detection of hepatitis B virus infection: A systematic review.

Authors:  Mallika Ghosh; Srijita Nandi; Shrinwanti Dutta; Malay Kumar Saha
Journal:  World J Hepatol       Date:  2015-10-18

5.  Multilaboratory evaluation of real-time PCR tests for hepatitis B virus DNA quantification.

Authors:  Angela M Caliendo; Alexander Valsamakis; James W Bremer; Andrea Ferreira-Gonzalez; Suzanne Granger; Linda Sabatini; Gregory J Tsongalis; Yun F Wayne Wang; Belinda Yen-Lieberman; Steve Young; Nell S Lurain
Journal:  J Clin Microbiol       Date:  2011-06-22       Impact factor: 5.948

6.  Comparison of real-time polymerase chain reaction with the COBAS Amplicor test for quantitation of hepatitis B virus DNA in serum samples.

Authors:  Ming Shi; Yong Zhang; Ying-Hua Zhu; Jing Zhang; Wei-Jia Xu
Journal:  World J Gastroenterol       Date:  2008-01-21       Impact factor: 5.742

7.  Clinical and virological characteristics post HBsAg seroclearance in hepatitis B virus carriers with hepatic steatosis versus those without.

Authors:  Chia-Ming Chu; Deng-Yn Lin; Yun-Fan Liaw
Journal:  Dig Dis Sci       Date:  2012-08-18       Impact factor: 3.199

8.  Performance of the Cobas AmpliPrep/Cobas TaqMan real-time PCR assay for hepatitis B virus DNA quantification.

Authors:  Stéphane Chevaliez; Magali Bouvier-Alias; Syria Laperche; Jean-Michel Pawlotsky
Journal:  J Clin Microbiol       Date:  2008-02-20       Impact factor: 5.948

9.  Evaluation of the Abbott RealTime HBV DNA assay and comparison to the Cobas AmpliPrep/Cobas TaqMan 48 assay in monitoring patients with chronic cases of hepatitis B.

Authors:  Marco Ciotti; Fabbio Marcuccilli; Tania Guenci; Maria Grazia Prignano; Carlo Federico Perno
Journal:  J Clin Microbiol       Date:  2008-02-13       Impact factor: 5.948

10.  Characterization of a new sensitive PCR assay for quantification of viral DNA isolated from patients with hepatitis B virus infections.

Authors:  Vincent Thibault; Christian Pichoud; Carolyn Mullen; James Rhoads; Jane B Smith; Alain Bitbol; Sven Thamm; Fabien Zoulim
Journal:  J Clin Microbiol       Date:  2007-10-17       Impact factor: 5.948

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