Literature DB >> 16455927

High interlaboratory reproducibility of DNA sequence-based typing of bacteria in a multicenter study.

M Aires-de-Sousa1, K Boye, H de Lencastre, A Deplano, M C Enright, J Etienne, A Friedrich, D Harmsen, A Holmes, X W Huijsdens, A M Kearns, A Mellmann, H Meugnier, J K Rasheed, E Spalburg, B Strommenger, M J Struelens, F C Tenover, J Thomas, U Vogel, H Westh, J Xu, W Witte.   

Abstract

Current DNA amplification-based typing methods for bacterial pathogens often lack interlaboratory reproducibility. In this international study, DNA sequence-based typing of the Staphylococcus aureus protein A gene (spa, 110 to 422 bp) showed 100% intra- and interlaboratory reproducibility without extensive harmonization of protocols for 30 blind-coded S. aureus DNA samples sent to 10 laboratories. Specialized software for automated sequence analysis ensured a common typing nomenclature.

Entities:  

Mesh：

Substances：

Year:  2006        PMID： 16455927      PMCID： PMC1392649          DOI： 10.1128/JCM.44.2.619-621.2006

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  17 in total

1.  Consensus guidelines for appropriate use and evaluation of microbial epidemiologic typing systems.

Authors:  M. J. Struelens
Journal:  Clin Microbiol Infect       Date:  1996-08       Impact factor: 8.067

2.  Development of a Canadian standardized protocol for subtyping methicillin-resistant Staphylococcus aureus using pulsed-field gel electrophoresis.

Authors:  M R Mulvey; L Chui; J Ismail; L Louie; C Murphy; N Chang; M Alfa
Journal:  J Clin Microbiol       Date:  2001-10       Impact factor: 5.948

Review 3.  Principles and applications of methods for DNA-based typing of microbial organisms.

Authors:  D M Olive; P Bean
Journal:  J Clin Microbiol       Date:  1999-06       Impact factor: 5.948

4.  Typing of methicillin-resistant Staphylococcus aureus in a university hospital setting by using novel software for spa repeat determination and database management.

Authors:  Dag Harmsen; Heike Claus; Wolfgang Witte; Jörg Rothgänger; Hermann Claus; Doris Turnwald; Ulrich Vogel
Journal:  J Clin Microbiol       Date:  2003-12       Impact factor: 5.948

5.  Molecular typing of methicillin-resistant Staphylococcus aureus on the basis of protein A gene polymorphism.

Authors:  H M Frénay; A E Bunschoten; L M Schouls; W J van Leeuwen; C M Vandenbroucke-Grauls; J Verhoef; F R Mooi
Journal:  Eur J Clin Microbiol Infect Dis       Date:  1996-01       Impact factor: 3.267

6.  Assessment of resolution and intercenter reproducibility of results of genotyping Staphylococcus aureus by pulsed-field gel electrophoresis of SmaI macrorestriction fragments: a multicenter study.

Authors:  A van Belkum; W van Leeuwen; M E Kaufmann; B Cookson; F Forey; J Etienne; R Goering; F Tenover; C Steward; F O'Brien; W Grubb; P Tassios; N Legakis; A Morvan; N El Solh; R de Ryck; M Struelens; S Salmenlinna; J Vuopio-Varkila; M Kooistra; A Talens; W Witte; H Verbrugh
Journal:  J Clin Microbiol       Date:  1998-06       Impact factor: 5.948

7.  Inter-centre comparison of pulsed-field gel electrophoresis for the typing of methicillin-resistant Staphylococcus aureus.

Authors:  B D Cookson; P Aparicio; A Deplano; M Struelens; R Goering; R Marples
Journal:  J Med Microbiol       Date:  1996-03       Impact factor: 2.472

8.  Comparison of traditional and molecular methods of typing isolates of Staphylococcus aureus.

Authors:  F C Tenover; R Arbeit; G Archer; J Biddle; S Byrne; R Goering; G Hancock; G A Hébert; B Hill; R Hollis
Journal:  J Clin Microbiol       Date:  1994-02       Impact factor: 5.948

9.  PulseNet: the molecular subtyping network for foodborne bacterial disease surveillance, United States.

Authors:  B Swaminathan; T J Barrett; S B Hunter; R V Tauxe
Journal:  Emerg Infect Dis       Date:  2001 May-Jun       Impact factor: 6.883

10.  Automated DNA sequence-based early warning system for the detection of methicillin-resistant Staphylococcus aureus outbreaks.

Authors:  Alexander Mellmann; Alexander W Friedrich; Nicole Rosenkötter; Jörg Rothgänger; Helge Karch; Ralf Reintjes; Dag Harmsen
Journal:  PLoS Med       Date:  2006-03       Impact factor: 11.069
View more
  82 in total

1.  An association between bacterial genotype combined with a high-vancomycin minimum inhibitory concentration and risk of endocarditis in methicillin-resistant Staphylococcus aureus bloodstream infection.

Authors:  Clare E Miller; Rahul Batra; Ben S Cooper; Amita K Patel; John Klein; Jonathan A Otter; Theodore Kypraios; Gary L French; Olga Tosas; Jonathan D Edgeworth
Journal:  Clin Infect Dis       Date:  2011-12-20       Impact factor: 9.079

2.  Comparison of two multilocus variable-number tandem-repeat methods and pulsed-field gel electrophoresis for differentiating highly clonal methicillin-resistant Staphylococcus aureus isolates.

Authors:  A Holmes; G F Edwards; E K Girvan; W Hannant; J Danial; J R Fitzgerald; K E Templeton
Journal:  J Clin Microbiol       Date:  2010-08-11       Impact factor: 5.948

3.  Recurrent furunculosis caused by a community-acquired Staphylococcus aureus strain belonging to the USA300 clone.

Authors:  Shirish Balachandra; Maria Pardos de la Gandara; Scott Salvato; Tracie Urban; Claude Parola; Chamanara Khalida; Rhonda G Kost; Teresa H Evering; Mina Pastagia; Brianna M D'Orazio; Alexander Tomasz; Herminia de Lencastre; Jonathan N Tobin
Journal:  Microb Drug Resist       Date:  2015-02-10       Impact factor: 3.431

4.  Predominance of community-associated methicillin-resistant Staphylococcus aureus strains carrying staphylococcal chromosome cassette mec type IVA in South Korea.

Authors:  Chulmin Park; Dong-Gun Lee; Sun Woo Kim; Su-Mi Choi; Sun Hee Park; Hye-Sun Chun; Jung-Hyun Choi; Jin-Hong Yoo; Wan Shik Shin; Jin Han Kang; Jong Hyun Kim; Soo Young Lee; Sun Mi Kim; Bok Yang Pyun
Journal:  J Clin Microbiol       Date:  2007-10-17       Impact factor: 5.948

5.  Evaluation of molecular typing methods in characterizing a European collection of epidemic methicillin-resistant Staphylococcus aureus strains: the HARMONY collection.

Authors:  Barry D Cookson; D Ashley Robinson; Alastair B Monk; Stephen Murchan; Ariane Deplano; Rafaël de Ryck; Marc J Struelens; Christina Scheel; Vivian Fussing; Saara Salmenlinna; Jaana Vuopio-Varkila; Christina Cuny; Wolfgang Witte; Panayotis T Tassios; Nikolas J Legakis; Willem van Leeuwen; Alex van Belkum; Anna Vindel; Javier Garaizar; Sara Haeggman; Barbro Olsson-Liljequist; Ulrika Ransjo; Manica Muller-Premru; Waleria Hryniewicz; Angela Rossney; Brian O'Connell; Benjamin D Short; Jonathan Thomas; Simon O'Hanlon; Mark C Enright
Journal:  J Clin Microbiol       Date:  2007-04-11       Impact factor: 5.948

6.  Characterization of clonal relatedness among the natural population of Staphylococcus aureus strains by using spa sequence typing and the BURP (based upon repeat patterns) algorithm.

Authors:  Alexander Mellmann; Thomas Weniger; Christoph Berssenbrügge; Ursula Keckevoet; Alexander W Friedrich; Dag Harmsen; Hajo Grundmann
Journal:  J Clin Microbiol       Date:  2008-06-04       Impact factor: 5.948

7.  High prevalence of ST121 in community-associated methicillin-susceptible Staphylococcus aureus lineages responsible for skin and soft tissue infections in Portuguese children.

Authors:  T Conceição; M Aires-de-Sousa; N Pona; M J Brito; C Barradas; R Coelho; T Sardinha; L Sancho; G de Sousa; M do Céu Machado; H de Lencastre
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-11-03       Impact factor: 3.267

8.  Fast and simple epidemiological typing of Pseudomonas aeruginosa using the double-locus sequence typing (DLST) method.

Authors:  P Basset; D S Blanc
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2013-12-11       Impact factor: 3.267

9.  Short communication: methicillin-resistant Staphylococcus aureus infections in children and young adults infected with HIV.

Authors:  Ashok Srinivasan; Steven Seifried; Liang Zhu; Wally Bitar; Deo K Srivastava; Jerry L Shenep; Matthew J Bankowski; Patricia M Flynn; Randall T Hayden
Journal:  AIDS Res Hum Retroviruses       Date:  2009-12       Impact factor: 2.205

10.  Analysis of typing methods for epidemiological surveillance of both methicillin-resistant and methicillin-susceptible Staphylococcus aureus strains.

Authors:  Nuno A Faria; João A Carrico; Duarte C Oliveira; Mário Ramirez; Hermínia de Lencastre
Journal:  J Clin Microbiol       Date:  2007-11-07       Impact factor: 5.948
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.