Literature DB >> 18524961

Characterization of clonal relatedness among the natural population of Staphylococcus aureus strains by using spa sequence typing and the BURP (based upon repeat patterns) algorithm.

Alexander Mellmann1, Thomas Weniger, Christoph Berssenbrügge, Ursula Keckevoet, Alexander W Friedrich, Dag Harmsen, Hajo Grundmann.   

Abstract

We evaluated the BURP (based upon repeat patterns) algorithm, which relies on sequencing of the Staphylococcus aureus protein A gene (spa), for its ability to infer clonal relatedness within a population of 110 wild-type strains. BURP clustering of the resulting 66 spa types was highly concordant with multilocus sequence typing (96.5% concordance) and pulsed-field gel electrophoresis (94.9%).

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Year:  2008        PMID： 18524961      PMCID： PMC2519486          DOI： 10.1128/JCM.00071-08

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  26 in total

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Authors:  H Grundmann; S Hori; G Tanner
Journal:  J Clin Microbiol       Date:  2001-11       Impact factor: 5.948

2.  National Nosocomial Infections Surveillance (NNIS) System Report, data summary from January 1992 through June 2003, issued August 2003.

Authors: 
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3.  Typing of methicillin-resistant Staphylococcus aureus in a university hospital setting by using novel software for spa repeat determination and database management.

Authors:  Dag Harmsen; Heike Claus; Wolfgang Witte; Jörg Rothgänger; Hermann Claus; Doris Turnwald; Ulrich Vogel
Journal:  J Clin Microbiol       Date:  2003-12       Impact factor: 5.948

4.  Evolution of Staphylococcus aureus by large chromosomal replacements.

Authors:  D Ashley Robinson; Mark C Enright
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5.  Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity.

Authors:  P R Hunter; M A Gaston
Journal:  J Clin Microbiol       Date:  1988-11       Impact factor: 5.948

6.  Comparison of protein A gene sequencing with pulsed-field gel electrophoresis and epidemiologic data for molecular typing of methicillin-resistant Staphylococcus aureus.

Authors:  Y W Tang; M G Waddington; D H Smith; J M Manahan; P C Kohner; L M Highsmith; H Li; F R Cockerill; R L Thompson; S O Montgomery; D H Persing
Journal:  J Clin Microbiol       Date:  2000-04       Impact factor: 5.948

7.  Determining the genetic structure of the natural population of Staphylococcus aureus: a comparison of multilocus sequence typing with pulsed-field gel electrophoresis, randomly amplified polymorphic DNA analysis, and phage typing.

Authors:  Hajo Grundmann; Satoshi Hori; Mark C Enright; Carol Webster; Adriana Tami; Edward J Feil; Tyrone Pitt
Journal:  J Clin Microbiol       Date:  2002-12       Impact factor: 5.948

8.  eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data.

Authors:  Edward J Feil; Bao C Li; David M Aanensen; William P Hanage; Brian G Spratt
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

9.  spa typing method for discriminating among Staphylococcus aureus isolates: implications for use of a single marker to detect genetic micro- and macrovariation.

Authors:  Larry Koreen; Srinivas V Ramaswamy; Edward A Graviss; Steven Naidich; James M Musser; Barry N Kreiswirth
Journal:  J Clin Microbiol       Date:  2004-02       Impact factor: 5.948

10.  Community-acquired methicillin-resistant Staphylococcus aureus carrying Panton-Valentine leukocidin genes: worldwide emergence.

Authors:  Francois Vandenesch; Timothy Naimi; Mark C Enright; Gerard Lina; Graeme R Nimmo; Helen Heffernan; Nadia Liassine; Michèle Bes; Timothy Greenland; Marie-Elisabeth Reverdy; Jerome Etienne
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  35 in total

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Authors:  F Szabados; J Woloszyn; M Kaase; S G Gatermann
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-10-09       Impact factor: 3.267

2.  High prevalence of Panton-Valentine leukocidin among methicillin-sensitive Staphylococcus aureus colonization isolates in rural Iowa.

Authors:  Shylo E Wardyn; Brett M Forshey; Tara C Smith
Journal:  Microb Drug Resist       Date:  2012-04-25       Impact factor: 3.431

3.  Genetic diversity of methicillin-resistant Staphylococcus aureus in a tertiary hospital in The Netherlands between 2002 and 2006.

Authors:  E Nulens; E E Stobberingh; E Smeets; H van Dessel; M A Welling; S Sebastian; F H van Tiel; P S Beisser; R H Deurenberg
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2009-01-08       Impact factor: 3.267

4.  Molecular characterisation of methicillin-susceptible and methicillin-resistant Staphylococcus aureus in inpatients and outpatients in Bosnia and Herzegovina.

Authors:  Selma Uzunović-Kamberović; Michelle I A Rijnders; Ellen E Stobberingh; Amir Ibrahimagić; Farah Kamberović; Tatjana Ille
Journal:  Wien Med Wochenschr       Date:  2012-10-10

5.  Population dynamics among methicillin-resistant Staphylococcus aureus isolates in Germany during a 6-year period.

Authors:  Frieder Schaumburg; Robin Köck; Alexander Mellmann; Laura Richter; Felicitas Hasenberg; André Kriegeskorte; Alexander W Friedrich; Sören Gatermann; Georg Peters; Christof von Eiff; Karsten Becker
Journal:  J Clin Microbiol       Date:  2012-07-18       Impact factor: 5.948

6.  Prevalence and risk factors for Staphylococcus aureus colonization in individuals entering maximum-security prisons.

Authors:  D V Mukherjee; C T A Herzig; C Y Jeon; C J Lee; Z L Apa; M Genovese; D Gage; C J Koenigsmann; F D Lowy; E L Larson
Journal:  Epidemiol Infect       Date:  2013-06-28       Impact factor: 2.451

7.  Obesity as a Determinant of Staphylococcus aureus Colonization Among Inmates in Maximum-Security Prisons in New York State.

Authors:  Montina Befus; Franklin D Lowy; Benjamin A Miko; Dhritiman V Mukherjee; Carolyn T A Herzig; Elaine L Larson
Journal:  Am J Epidemiol       Date:  2015-08-19       Impact factor: 4.897

8.  Characterization of virulence factors and genetic background of Staphylococcus aureus isolated from Peking University People's Hospital between 2005 and 2009.

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Journal:  Curr Microbiol       Date:  2010-04-10       Impact factor: 2.188

9.  Prospective multicenter surveillance identifies Staphylococcus aureus infections caused by livestock-associated strains in an agricultural state.

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Journal:  Diagn Microbiol Infect Dis       Date:  2016-04-26       Impact factor: 2.803

10.  spa typing and enterotoxin gene profile of Staphylococcus aureus isolated from bovine raw milk in Korea.

Authors:  Sun Young Hwang; Young Kyung Park; Hye Cheong Koo; Yong Ho Park
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