Literature DB >> 16434185

Argonaute and RNA--getting into the groove.

Ji-Joon Song1, Leemor Joshua-Tor.   

Abstract

RNAi has made an enormous impact on biology in a very short period of time. It became an extraordinarily useful and simple tool for gene silencing, even as its fascinating mechanism was gradually unraveling. Understanding the mechanism of RNAi-related pathways, including both transcriptional and posttranscriptional gene silencing and even processes such as DNA elimination in Tetrahymena, have benefited from an incredible marriage of genetics, biochemistry, molecular biology, bioinformatics and finally structural biology. Structural biology played a key role in deciphering the role that a central player--the Argonaute protein--has in all RNAi processes.

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Year:  2006        PMID: 16434185     DOI: 10.1016/j.sbi.2006.01.010

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  29 in total

1.  An antiviral RISC isolated from Tobacco rattle virus-infected plants.

Authors:  Jessica J Ciomperlik; Rustem T Omarov; Herman B Scholthof
Journal:  Virology       Date:  2011-01-26       Impact factor: 3.616

2.  Strand-specific 5'-O-methylation of siRNA duplexes controls guide strand selection and targeting specificity.

Authors:  Po Yu Chen; Lasse Weinmann; Dimos Gaidatzis; Yi Pei; Mihaela Zavolan; Thomas Tuschl; Gunter Meister
Journal:  RNA       Date:  2007-12-19       Impact factor: 4.942

3.  Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide.

Authors:  Shijun Mi; Tao Cai; Yugang Hu; Yemiao Chen; Emily Hodges; Fangrui Ni; Liang Wu; Shan Li; Huanyu Zhou; Chengzu Long; She Chen; Gregory J Hannon; Yijun Qi
Journal:  Cell       Date:  2008-03-13       Impact factor: 41.582

4.  Constructing multi-resolution Markov State Models (MSMs) to elucidate RNA hairpin folding mechanisms.

Authors:  Xuhui Huang; Yuan Yao; Gregory R Bowman; Jian Sun; Leonidas J Guibas; Gunnar Carlsson; Vijay S Pande
Journal:  Pac Symp Biocomput       Date:  2010

Review 5.  Argonautes confront new small RNAs.

Authors:  Christopher R Faehnle; Leemor Joshua-Tor
Journal:  Curr Opin Chem Biol       Date:  2007-10       Impact factor: 8.822

Review 6.  RNAi pathway integration in Caenorhabditis elegans development.

Authors:  Sadegh Azimzadeh Jamalkandi; Ali Masoudi-Nejad
Journal:  Funct Integr Genomics       Date:  2011-07-22       Impact factor: 3.410

7.  Characterization of export receptor exportins (XPOs) in the parasite Schistosoma mansoni.

Authors:  Fabiano C P Abreu; Roberta V Pereira; Victor F Oliveira; Matheus de S Gomes; Liana K Jannotti-Passos; William C Borges; Renata Guerra-Sá
Journal:  Parasitol Res       Date:  2013-09-08       Impact factor: 2.289

Review 8.  Evolutionary conservation and expression of human RNA-binding proteins and their role in human genetic disease.

Authors:  Stefanie Gerstberger; Markus Hafner; Manuel Ascano; Thomas Tuschl
Journal:  Adv Exp Med Biol       Date:  2014       Impact factor: 2.622

9.  Rice MicroRNA effector complexes and targets.

Authors:  Liang Wu; Qingqing Zhang; Huanyu Zhou; Fangrui Ni; Xueying Wu; Yijun Qi
Journal:  Plant Cell       Date:  2009-11-10       Impact factor: 11.277

10.  Analysis and characterization of the genes encoding the Dicer and Argonaute proteins of Schistosoma japonicum.

Authors:  Rong Luo; Xiangyang Xue; Zhangxun Wang; Jun Sun; Ying Zou; Weiqing Pan
Journal:  Parasit Vectors       Date:  2010-09-17       Impact factor: 3.876

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