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Literature DB >> 1643306

Intracisternal A-particle-specific oligonucleotides provide multilocus probes for genetic linkage studies in the mouse.

Abstract

Oligonucleotide probes representing distinct intracisternal A-particle (IAP) subfamilies were derived from the long terminal repeats (LTRs) of transcriptionally active IAP genes in normal mouse cells. These probes were used to examine the distribution of IAP proviral elements in the genomic DNA of several inbred mouse strains. Each oligonucleotide probe identified multiple polymorphisms between the different strains. The distribution of polymorphic restriction fragments among the CXB set of recombinant inbred (RI) strains demonstrates the feasibility of using these probes for chromosome mapping. These and other subset-specific IAP probes can provide a useful series of multilocus markers for genomic mapping and genetic analysis in the mouse.

Entities: Chemical Gene Species

Mesh：

Substances：
Oligonucleotide Probes

Year: 1992 PMID： 1643306 DOI： 10.1007/bf00356154

Source DB: PubMed Journal: Mamm Genome ISSN： 0938-8990 Impact factor: 2.957

20 in total

1. Polymorphism of murine endogenous proviruses revealed by using virus class-specific oligonucleotide probes.

Authors: J P Stoye; J M Coffin
Journal: J Virol Date: 1988-01 Impact factor: 5.103

2. Individual-specific 'fingerprints' of human DNA.

Authors: A J Jeffreys; V Wilson; S L Thein
Journal: Nature Date: 1985 Jul 4-10 Impact factor: 49.962

3. Nucleotide sequences of murine intracisternal A-particle gene LTRs have extensive variability within the R region.

Authors: R J Christy; A R Brown; B B Gourlie; R C Huang
Journal: Nucleic Acids Res Date: 1985-01-11 Impact factor: 16.971

4. Hybridization of genomic DNA to oligonucleotide probes in the presence of tetramethylammonium chloride.

Authors: A G DiLella; S L Woo
Journal: Methods Enzymol Date: 1987 Impact factor: 1.600

5. Base composition-independent hybridization in tetramethylammonium chloride: a method for oligonucleotide screening of highly complex gene libraries.

Authors: W I Wood; J Gitschier; L A Lasky; R M Lawn
Journal: Proc Natl Acad Sci U S A Date: 1985-03 Impact factor: 11.205

Review 6. The intracisternal A-particle gene family: structure and functional aspects.

Authors: E L Kuff; K K Lueders
Journal: Adv Cancer Res Date: 1988 Impact factor: 6.242

7. Direct molecular identification of the mouse pink-eyed unstable mutation by genome scanning.

Authors: M H Brilliant; Y Gondo; E M Eicher
Journal: Science Date: 1991-04-26 Impact factor: 47.728

8. Role of endogenous retroviruses as mutagens: the hairless mutation of mice.

Authors: J P Stoye; S Fenner; G E Greenoak; C Moran; J M Coffin
Journal: Cell Date: 1988-07-29 Impact factor: 41.582

9. Intracisternal A-particle genes: identification in the genome of Mus musculus and comparison of multiple isolates from a mouse gene library.

Authors: K K Lueders; E L Kuff
Journal: Proc Natl Acad Sci U S A Date: 1980-06 Impact factor: 11.205

10. Characterization and chromosomal distribution of endogenous mouse mammary tumor viruses of European mouse strains STS/A and GR/A.

Authors: R Michalides; R Verstraeten; F W Shen; J Hilgers
Journal: Virology Date: 1985-04-30 Impact factor: 3.616

6 in total

1. Co-amplification to tail-to-tail copies of MuRVY and IAPE retroviral genomes on the Mus musculus Y chromosome.

Authors: J Fennelly; K Harper; S Laval; E Wright; M Plumb
Journal: Mamm Genome Date: 1996-01 Impact factor: 2.957

2. Differences in intracisternal A-particle and GLN proviral loci suggest a genetic contribution from a DBA/2-like strain in generation of the C57BL/Ks strain.

Authors: K K Lueders
Journal: Mamm Genome Date: 1995-02 Impact factor: 2.957