Literature DB >> 16432233

Variable molecular clocks in hominoids.

Navin Elango1, James W Thomas, Soojin V Yi.   

Abstract

Generation time is an important determinant of a neutral molecular clock. There are several human-specific life history traits that led to a substantially longer generation time in humans than in other hominoids. Indeed, a long generation time is considered an important trait that distinguishes humans from their closest relatives. Therefore, humans may exhibit a significantly slower molecular clock as compared to other hominoids. To investigate this hypothesis, we performed a large-scale analysis of lineage-specific rates of single-nucleotide substitutions among hominoids. We found that humans indeed exhibit a significant slowdown of molecular evolution compared to chimpanzees and other hominoids. However, the amount of fixed differences between humans and chimpanzees appears extremely small, suggesting a very recent evolution of human-specific life history traits. Notably, chimpanzees also exhibit a slower rate of molecular evolution compared to gorillas and orangutans in the regions analyzed.

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Year:  2006        PMID: 16432233      PMCID: PMC1360599          DOI: 10.1073/pnas.0510716103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  47 in total

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Journal:  Nature       Date:  2003-08-14       Impact factor: 49.962

2.  Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes.

Authors:  W James Kent; Robert Baertsch; Angie Hinrichs; Webb Miller; David Haussler
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-19       Impact factor: 11.205

3.  Gene expression, synteny, and local similarity in human noncoding mutation rates.

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6.  The ENCODE (ENCyclopedia Of DNA Elements) Project.

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7.  Why do human diversity levels vary at a megabase scale?

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8.  Evidence for higher rates of nucleotide substitution in rodents than in man.

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9.  Recombination drives the evolution of GC-content in the human genome.

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10.  DNA sequence and comparative analysis of chimpanzee chromosome 22.

Authors:  H Watanabe; A Fujiyama; M Hattori; T D Taylor; A Toyoda; Y Kuroki; H Noguchi; A BenKahla; H Lehrach; R Sudbrak; M Kube; S Taenzer; P Galgoczy; M Platzer; M Scharfe; G Nordsiek; H Blöcker; I Hellmann; P Khaitovich; S Pääbo; R Reinhardt; H-J Zheng; X-L Zhang; G-F Zhu; B-F Wang; G Fu; S-X Ren; G-P Zhao; Z Chen; Y-S Lee; J-E Cheong; S-H Choi; K-M Wu; T-T Liu; K-J Hsiao; S-F Tsai; C-G Kim; S OOta; T Kitano; Y Kohara; N Saitou; H-S Park; S-Y Wang; M-L Yaspo; Y Sakaki
Journal:  Nature       Date:  2004-05-27       Impact factor: 49.962

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  42 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

2.  Extreme genomic variation in a natural population.

Authors:  Kerrin S Small; Michael Brudno; Matthew M Hill; Arend Sidow
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3.  Molecular clock: an anti-neo-Darwinian legacy.

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Journal:  Genetics       Date:  2007-05       Impact factor: 4.562

4.  Accelerated rate of gene gain and loss in primates.

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5.  Evolutionary rate variation in Old World monkeys.

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Review 6.  Explaining human uniqueness: genome interactions with environment, behaviour and culture.

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7.  Age at first reproduction explains rate variation in the strepsirrhine molecular clock.

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8.  First comparative study of primate morphological and molecular evolutionary rates including muscle data: implications for the tempo and mode of primate and human evolution.

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Review 9.  Reconstructing phylogenies and phenotypes: a molecular view of human evolution.

Authors:  Brenda J Bradley
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10.  Primate phylogenomics: developing numerous nuclear non-coding, non-repetitive markers for ecological and phylogenetic applications and analysis of evolutionary rate variation.

Authors:  Zuogang Peng; Navin Elango; Derek E Wildman; Soojin V Yi
Journal:  BMC Genomics       Date:  2009-05-26       Impact factor: 3.969

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