Literature DB >> 16427007

DNA-induced switch from independent to sequential dTTP hydrolysis in the bacteriophage T7 DNA helicase.

Donald J Crampton1, Sourav Mukherjee, Charles C Richardson.   

Abstract

We show that the mechanisms of DNA-dependent and -independent dTTP hydrolysis by the gene 4 protein of bacteriophage T7 differ in the pathways by which these reactions are catalyzed. In the presence of dTTP, gene 4 protein monomers assemble as a ring that binds single-stranded DNA and couples the hydrolysis of dTTP to unidirectional translocation and the unwinding of duplex DNA. When mixing wild-type monomers with monomers lacking the catalytic base for the dTTPase reaction, we observe that each wild-type subunit hydrolyzes dTTP independently in the absence of single-stranded DNA. Conversely, when either these catalytically inactive monomers or altered monomers incapable of binding single-stranded DNA are mixed with wild-type monomers, a small fraction of altered to wild-type monomers causes a sharp decline in DNA-dependent dTTP hydrolysis. We propose that sequential hydrolysis of dTTP is coupled to the transfer of single-stranded DNA from subunit to adjacent subunit.

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Year:  2006        PMID: 16427007     DOI: 10.1016/j.molcel.2005.11.027

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  47 in total

1.  Primer initiation and extension by T7 DNA primase.

Authors:  Udi Qimron; Seung-Joo Lee; Samir M Hamdan; Charles C Richardson
Journal:  EMBO J       Date:  2006-04-27       Impact factor: 11.598

Review 2.  The nuts and bolts of ring-translocase structure and mechanism.

Authors:  Artem Y Lyubimov; Melania Strycharska; James M Berger
Journal:  Curr Opin Struct Biol       Date:  2011-02-01       Impact factor: 6.809

Review 3.  On helicases and other motor proteins.

Authors:  Eric J Enemark; Leemor Joshua-Tor
Journal:  Curr Opin Struct Biol       Date:  2008-03-10       Impact factor: 6.809

4.  Intersubunit allosteric communication mediated by a conserved loop in the MCM helicase.

Authors:  Elizabeth R Barry; Janet E Lovett; Alessandro Costa; Susan M Lea; Stephen D Bell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-21       Impact factor: 11.205

Review 5.  The minichromosome maintenance replicative helicase.

Authors:  Stephen D Bell; Michael R Botchan
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-11-01       Impact factor: 10.005

6.  Residues in the central beta-hairpin of the DNA helicase of bacteriophage T7 are important in DNA unwinding.

Authors:  Ajit K Satapathy; Anna B Kochaniak; Sourav Mukherjee; Donald J Crampton; Antoine van Oijen; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-29       Impact factor: 11.205

7.  An in trans interaction at the interface of the helicase and primase domains of the hexameric gene 4 protein of bacteriophage T7 modulates their activities.

Authors:  Bin Zhu; Seung-Joo Lee; Charles C Richardson
Journal:  J Biol Chem       Date:  2009-07-01       Impact factor: 5.157

8.  Coupling of DNA unwinding to nucleotide hydrolysis in a ring-shaped helicase.

Authors:  Ilker Donmez; Smita S Patel
Journal:  EMBO J       Date:  2008-05-22       Impact factor: 11.598

9.  Physiological and biochemical defects in carboxyl-terminal mutants of mitochondrial DNA helicase.

Authors:  Yuichi Matsushima; Carol L Farr; Li Fan; Laurie S Kaguni
Journal:  J Biol Chem       Date:  2008-06-30       Impact factor: 5.157

10.  Promiscuous usage of nucleotides by the DNA helicase of bacteriophage T7: determinants of nucleotide specificity.

Authors:  Ajit K Satapathy; Donald J Crampton; Benjamin B Beauchamp; Charles C Richardson
Journal:  J Biol Chem       Date:  2009-03-17       Impact factor: 5.157

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