Literature DB >> 16425231

Fine characterization of the Iceman's mtDNA haplogroup.

Franco Rollo1, Luca Ermini, Stefania Luciani, Isolina Marota, Cristina Olivieri, Donata Luiselli.   

Abstract

Starting from specimens of the intestinal contents of the so-called Tyrolean Iceman or Otzi (5,350-5,100 years before present), it was possible by polymerase chain reaction to amplify fragments of the human mitochondrial DNA (mtDNA) control region that correspond to the sequence found in 1994 at the Munich and Oxford laboratories and which had been attributed to the original DNA of the mummy. The particularly favorable condition of the specimens, showing very low contamination levels, made it easier to extend the analyses to the coding region, which had not previously been considered. The mtDNA of the European population is currently divided into nine (H, T, U, V, W, X, I, J, and K) main groups (haplogroups). The K haplogroup, in particular, is composed of two (K1 and K2) subclusters. The results demonstrate that the Iceman's mtDNA belongs to the K1 subcluster, yet it does not fit any of the three known branches (a, b, and c) into which the K1 subcluster is presently divided. In addition, some other sites, reported to be linked to environmental adaptation or pathologies, were investigated.

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Year:  2006        PMID: 16425231     DOI: 10.1002/ajpa.20384

Source DB:  PubMed          Journal:  Am J Phys Anthropol        ISSN: 0002-9483            Impact factor:   2.868


  7 in total

1.  New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing.

Authors:  Andreas Keller; Angela Graefen; Markus Ball; Mark Matzas; Valesca Boisguerin; Frank Maixner; Petra Leidinger; Christina Backes; Rabab Khairat; Michael Forster; Björn Stade; Andre Franke; Jens Mayer; Jessica Spangler; Stephen McLaughlin; Minita Shah; Clarence Lee; Timothy T Harkins; Alexander Sartori; Andres Moreno-Estrada; Brenna Henn; Martin Sikora; Ornella Semino; Jacques Chiaroni; Siiri Rootsi; Natalie M Myres; Vicente M Cabrera; Peter A Underhill; Carlos D Bustamante; Eduard Egarter Vigl; Marco Samadelli; Giovanna Cipollini; Jan Haas; Hugo Katus; Brian D O'Connor; Marc R J Carlson; Benjamin Meder; Nikolaus Blin; Eckart Meese; Carsten M Pusch; Albert Zink
Journal:  Nat Commun       Date:  2012-02-28       Impact factor: 14.919

2.  A statistical approach to identify ancient template DNA.

Authors:  Agnar Helgason; Snaebjörn Pálsson; Carles Lalueza-Fox; Shyamali Ghosh; Sigrún Sigurdardóttir; Adam Baker; Birgir Hrafnkelsson; Lilja Arnadóttir; Unnur Thorsteinsdóttir; Kári Stefánsson
Journal:  J Mol Evol       Date:  2007-06-25       Impact factor: 2.395

Review 3.  Ancestry of modern Europeans: contributions of ancient DNA.

Authors:  Marie Lacan; Christine Keyser; Eric Crubézy; Bertrand Ludes
Journal:  Cell Mol Life Sci       Date:  2012-10-11       Impact factor: 9.261

4.  Genotyping human ancient mtDNA control and coding region polymorphisms with a multiplexed Single-Base-Extension assay: the singular maternal history of the Tyrolean Iceman.

Authors:  Phillip Endicott; Juan J Sanchez; Irene Pichler; Paul Brotherton; Jerome Brooks; Eduard Egarter-Vigl; Alan Cooper; Peter Pramstaller
Journal:  BMC Genet       Date:  2009-06-19       Impact factor: 2.797

5.  Preferential access to genetic information from endogenous hominin ancient DNA and accurate quantitative SNP-typing via SPEX.

Authors:  Paul Brotherton; Juan J Sanchez; Alan Cooper; Phillip Endicott
Journal:  Nucleic Acids Res       Date:  2009-10-27       Impact factor: 16.971

6.  Effects of formalin fixation, paraffin embedding, and time of storage on DNA preservation in brain tissue: a BrainNet Europe study.

Authors:  Isidre Ferrer; Judith Armstrong; Sabina Capellari; Piero Parchi; Thomas Arzberger; Jeanne Bell; Herbert Budka; Thomas Ströbel; Giorgio Giaccone; Giacomina Rossi; Nenad Bogdanovic; Peter Fakai; Andrea Schmitt; Peter Riederers; Safa Al-Sarraj; Rivka Ravid; Hans Kretzschmar
Journal:  Brain Pathol       Date:  2007-04-23       Impact factor: 6.508

7.  Whole mitochondrial DNA sequencing in Alpine populations and the genetic history of the Neolithic Tyrolean Iceman.

Authors:  V Coia; G Cipollini; P Anagnostou; F Maixner; C Battaggia; F Brisighelli; A Gómez-Carballa; G Destro Bisol; A Salas; A Zink
Journal:  Sci Rep       Date:  2016-01-14       Impact factor: 4.379

  7 in total

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