Literature DB >> 16417386

Real-time monitoring of chemical transformations by ultrafast 2D NMR spectroscopy.

Maayan Gal1, Mor Mishkovsky, Lucio Frydman.   

Abstract

An approach enabling the acquisition of 2D nuclear magnetic resonance (NMR) spectra within a single scan has been recently proposed. A promising application opened up by this "ultrafast" data acquisition format concerns the monitoring of chemical transformations as they happen, in real time. The present paper illustrates some of this potential with two examples: (i) following an H/D exchange process that occurs upon dissolving a protonated protein in D2O, and (ii) real-time in situ tracking of a transient Meisenheimer complex that forms upon rapidly mixing two organic reactants inside the NMR observation tube. The first of these measurements involved acquiring a train of 2D 1H-15N HSQC NMR spectra separated by ca. 4 s; following an initial dead time, this allowed us to monitor the kinetics of hydrogen exchange in ubiquitin at a site-resolved level. The second approach enabled us to observe, within ca. 2 s after the triggering of the reaction, a competition between thermodynamic and kinetic controls via changes in a series of 2D TOCSY patterns. The real-time dynamic experiments hereby introduced thus add to an increasing family of fast characterization techniques based on 2D NMR; their potential and limitations are briefly discussed.

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Year:  2006        PMID: 16417386     DOI: 10.1021/ja0564158

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

1.  Spatially encoded strategies in the execution of biomolecular-oriented 3D NMR experiments.

Authors:  Mor Mishkovsky; Maayan Gal; Lucio Frydman
Journal:  J Biomol NMR       Date:  2007-10-17       Impact factor: 2.835

2.  Real-time NMR monitoring of intermediates and labile products of the bifunctional enzyme UDP-apiose/UDP-xylose synthase.

Authors:  Paul Guyett; John Glushka; Xiaogang Gu; Maor Bar-Peled
Journal:  Carbohydr Res       Date:  2009-03-27       Impact factor: 2.104

3.  An improved ultrafast 2D NMR experiment: towards atom-resolved real-time studies of protein kinetics at multi-Hz rates.

Authors:  Maayan Gal; Thomas Kern; Paul Schanda; Lucio Frydman; Bernhard Brutscher
Journal:  J Biomol NMR       Date:  2008-11-04       Impact factor: 2.835

Review 4.  Sensitivity enhancement in solution NMR: emerging ideas and new frontiers.

Authors:  Jung Ho Lee; Yusuke Okuno; Silvia Cavagnero
Journal:  J Magn Reson       Date:  2014-04       Impact factor: 2.229

5.  Binding site identification and structure determination of protein-ligand complexes by NMR a semiautomated approach.

Authors:  Joshua J Ziarek; Francis C Peterson; Betsy L Lytle; Brian F Volkman
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

6.  HyperSPASM NMR: a new approach to single-shot 2D correlations on DNP-enhanced samples.

Authors:  Kevin J Donovan; Lucio Frydman
Journal:  J Magn Reson       Date:  2012-10-29       Impact factor: 2.229

7.  A 300-fold enhancement of imino nucleic acid resonances by hyperpolarized water provides a new window for probing RNA refolding by 1D and 2D NMR.

Authors:  Mihajlo Novakovic; Gregory L Olsen; György Pintér; Daniel Hymon; Boris Fürtig; Harald Schwalbe; Lucio Frydman
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-16       Impact factor: 11.205

8.  Monitoring mechanistic details in the synthesis of pyrimidines via real-time, ultrafast multidimensional NMR spectroscopy.

Authors:  Zulay D Pardo; Gregory L Olsen; María Encarnación Fernández-Valle; Lucio Frydman; Roberto Martínez-Álvarez; Antonio Herrera
Journal:  J Am Chem Soc       Date:  2012-01-27       Impact factor: 15.419

Review 9.  Ultrafast 2D NMR: an emerging tool in analytical spectroscopy.

Authors:  Patrick Giraudeau; Lucio Frydman
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2014       Impact factor: 10.745

10.  Time-resolved multidimensional NMR with non-uniform sampling.

Authors:  Maxim Mayzel; Joakim Rosenlöw; Linnéa Isaksson; Vladislav Y Orekhov
Journal:  J Biomol NMR       Date:  2014-01-17       Impact factor: 2.835

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