Literature DB >> 16415790

Maintenance of plastid RNA editing activities independently of their target sites.

Michael Tillich1, Peter Poltnigg, Sergei Kushnir, Christian Schmitz-Linneweber.   

Abstract

RNA editing in plant organelles is mediated by site-specific, nuclear-encoded factors. Previous data suggested that the maintenance of these factors depends on the presence of their rapidly evolving cognate sites. The surprising ability of allotetraploid Nicotiana tabacum (tobacco) to edit a foreign site in the chloroplast ndhA messenger RNA was thought to be inherited from its diploid male ancestor, Nicotiana tomentosiformis. Here, we show that the same ndhA editing activity is also present in Nicotiana sylvestris, which is the female diploid progenitor of tobacco and which lacks the ndhA site. Hence, heterologous editing is not simply a result of tobacco's allopolyploid genome organization. Analyses of other editing sites after sexual or somatic transfer between land plants showed that heterologous editing occurs at a surprisingly high frequency. This suggests that the corresponding editing activities are conserved despite the absence of their target sites, potentially because they serve other functions in the plant cell.

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Year:  2006        PMID: 16415790      PMCID: PMC1456890          DOI: 10.1038/sj.embor.7400619

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  24 in total

1.  Edited transcripts compete with unedited mRNAs for trans-acting editing factors in higher plant chloroplasts.

Authors:  M L Reed; S M Lyi; M R Hanson
Journal:  Gene       Date:  2001-07-11       Impact factor: 3.688

2.  Cross-competition in transgenic chloroplasts expressing single editing sites reveals shared cis elements.

Authors:  Anne-Laure Chateigner-Boutin; Maureen R Hanson
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

3.  Recognition of RNA editing sites is directed by unique proteins in chloroplasts: biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts.

Authors:  Tetsuya Miyamoto; Junichi Obokata; Masahiro Sugiura
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

4.  A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts.

Authors:  Emi Kotera; Masao Tasaka; Toshiharu Shikanai
Journal:  Nature       Date:  2005-01-20       Impact factor: 49.962

5.  Editing of the chloroplast ndhB encoded transcript shows divergence between closely related members of the grass family (Poaceae).

Authors:  R Freyer; C López; R M Maier; M Martín; B Sabater; H Kössel
Journal:  Plant Mol Biol       Date:  1995-11       Impact factor: 4.076

6.  High-frequency plastid transformation in tobacco by selection for a chimeric aadA gene.

Authors:  Z Svab; P Maliga
Journal:  Proc Natl Acad Sci U S A       Date:  1993-02-01       Impact factor: 11.205

Review 7.  On the evolution of RNA editing.

Authors:  P S Covello; M W Gray
Journal:  Trends Genet       Date:  1993-08       Impact factor: 11.639

8.  Heterologous, splicing-dependent RNA editing in chloroplasts: allotetraploidy provides trans-factors.

Authors:  C Schmitz-Linneweber; M Tillich; R G Herrmann; R M Maier
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

9.  Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis.

Authors:  Claire Lurin; Charles Andrés; Sébastien Aubourg; Mohammed Bellaoui; Frédérique Bitton; Clémence Bruyère; Michel Caboche; Cédrig Debast; José Gualberto; Beate Hoffmann; Alain Lecharny; Monique Le Ret; Marie-Laure Martin-Magniette; Hakim Mireau; Nemo Peeters; Jean-Pierre Renou; Boris Szurek; Ludivine Taconnat; Ian Small
Journal:  Plant Cell       Date:  2004-07-21       Impact factor: 11.277

10.  Alterations in chlorophyll a/b binding proteins in Solanaceae cybrids.

Authors:  E Babiychuk; R Schantz; N Cherep; J H Weil; Y Gleba; S Kushnir
Journal:  Mol Gen Genet       Date:  1995-12-20
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  8 in total

1.  Faithful editing of a tomato-specific mRNA editing site in transgenic tobacco chloroplasts.

Authors:  Daniel Karcher; Sabine Kahlau; Ralph Bock
Journal:  RNA       Date:  2007-12-07       Impact factor: 4.942

2.  Establishment of a Heterologous RNA Editing Event in Chloroplasts.

Authors:  Filomena Vanessa Loiacono; Wolfram Thiele; Mark Aurel Schöttler; Michael Tillich; Ralph Bock
Journal:  Plant Physiol       Date:  2019-09-13       Impact factor: 8.340

3.  Plastid RNA editing reduction accompanied with genetic variations in Cymbidium, a genus with diverse lifestyle modes.

Authors:  Mengqing Zhe; Le Zhang; Fang Liu; Yiwei Huang; Weishu Fan; Junbo Yang; Andan Zhu
Journal:  Plant Divers       Date:  2021-07-12

4.  Post-transcriptional control of chloroplast gene expression.

Authors:  Eva M del Campo
Journal:  Gene Regul Syst Bio       Date:  2009-03-12

5.  Loss of matK RNA editing in seed plant chloroplasts.

Authors:  Michael Tillich; Vinh Le Sy; Katrin Schulerowitz; Arndt von Haeseler; Uwe G Maier; Christian Schmitz-Linneweber
Journal:  BMC Evol Biol       Date:  2009-08-13       Impact factor: 3.260

6.  Molecular evolution of pentatricopeptide repeat genes reveals truncation in species lacking an editing target and structural domains under distinct selective pressures.

Authors:  Michael L Hayes; Karolyn Giang; R Michael Mulligan
Journal:  BMC Evol Biol       Date:  2012-05-14       Impact factor: 3.260

7.  Two RNA editing sites with cis-acting elements of moderate sequence identity are recognized by an identical site-recognition protein in tobacco chloroplasts.

Authors:  Yusuke Kobayashi; Mitsuhiro Matsuo; Koji Sakamoto; Tatsuya Wakasugi; Kyoji Yamada; Junichi Obokata
Journal:  Nucleic Acids Res       Date:  2007-11-21       Impact factor: 16.971

8.  Frequent chloroplast RNA editing in early-branching flowering plants: pilot studies on angiosperm-wide coexistence of editing sites and their nuclear specificity factors.

Authors:  Anke Hein; Monika Polsakiewicz; Volker Knoop
Journal:  BMC Evol Biol       Date:  2016-01-25       Impact factor: 3.260

  8 in total

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