Literature DB >> 16405910

Folding transitions during assembly of the eukaryotic mRNA cap-binding complex.

Tobias von der Haar1, Yuko Oku, Marina Ptushkina, Nathan Moerke, Gerhard Wagner, John D Gross, John E G McCarthy.   

Abstract

The cap-binding protein eIF4E is the first in a chain of translation initiation factors that recruit 40S ribosomal subunits to the 5' end of eukaryotic mRNA. During cap-dependent translation, this protein binds to the 5'-terminal m(7)Gppp cap of the mRNA, as well as to the adaptor protein eIF4G. The latter then interacts with small ribosomal subunit-bound proteins, thereby promoting the mRNA recruitment process. Here, we show apo-eIF4E to be a protein that contains extensive unstructured regions, which are induced to fold upon recognition of the cap structure. Binding of eIF4G to apo-eIF4E likewise induces folding of the protein into a state that is similar to, but not identical with, that of cap-bound eIF4E. At the same time, binding of each of the binding partners of eIF4E modulates the kinetics with which it interacts with the other partner. We present structural, kinetic and mutagenesis data that allow us to deduce some of the detailed folding transitions that take place during the eIF4E interactions.

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Year:  2005        PMID: 16405910     DOI: 10.1016/j.jmb.2005.12.034

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  19 in total

1.  Cap-free structure of eIF4E suggests a basis for conformational regulation by its ligands.

Authors:  Laurent Volpon; Michael J Osborne; Ivan Topisirovic; Nadeem Siddiqui; Katherine L B Borden
Journal:  EMBO J       Date:  2006-10-12       Impact factor: 11.598

2.  The 3' cap-independent translation element of Barley yellow dwarf virus binds eIF4F via the eIF4G subunit to initiate translation.

Authors:  Krzysztof Treder; Elizabeth L Pettit Kneller; Edwards M Allen; Zhaohui Wang; Karen S Browning; W Allen Miller
Journal:  RNA       Date:  2007-11-19       Impact factor: 4.942

3.  Intrinsic RNA binding by the eukaryotic initiation factor 4F depends on a minimal RNA length but not on the m7G cap.

Authors:  Nicholas M Kaye; Kelly J Emmett; William C Merrick; Eckhard Jankowsky
Journal:  J Biol Chem       Date:  2009-05-04       Impact factor: 5.157

4.  Kinetic mechanism for assembly of the m7GpppG.eIF4E.eIF4G complex.

Authors:  Sergey V Slepenkov; Nadejda L Korneeva; Robert E Rhoads
Journal:  J Biol Chem       Date:  2008-07-09       Impact factor: 5.157

5.  eIF4E3 acts as a tumor suppressor by utilizing an atypical mode of methyl-7-guanosine cap recognition.

Authors:  Michael J Osborne; Laurent Volpon; Jack A Kornblatt; Biljana Culjkovic-Kraljacic; Aurélie Baguet; Katherine L B Borden
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

6.  Crystal structure of a minimal eIF4E-Cup complex reveals a general mechanism of eIF4E regulation in translational repression.

Authors:  Kerstin Kinkelin; Katharina Veith; Marlene Grünwald; Fulvia Bono
Journal:  RNA       Date:  2012-07-25       Impact factor: 4.942

7.  Minimum-noise production of translation factor eIF4G maps to a mechanistically determined optimal rate control window for protein synthesis.

Authors:  Xiang Meng; Helena Firczuk; Paola Pietroni; Richard Westbrook; Estelle Dacheux; Pedro Mendes; John E G McCarthy
Journal:  Nucleic Acids Res       Date:  2016-12-07       Impact factor: 16.971

8.  Binding specificities and potential roles of isoforms of eukaryotic initiation factor 4E in Leishmania.

Authors:  Yael Yoffe; Joanna Zuberek; Asaf Lerer; Magdalena Lewdorowicz; Janusz Stepinski; Michael Altmann; Edward Darzynkiewicz; Michal Shapira
Journal:  Eukaryot Cell       Date:  2006-10-13

9.  Reduction in structural disorder and functional complexity in the thermal adaptation of prokaryotes.

Authors:  Prasad V Burra; Lajos Kalmar; Peter Tompa
Journal:  PLoS One       Date:  2010-08-11       Impact factor: 3.240

10.  Structural insights into parasite eIF4E binding specificity for m7G and m2,2,7G mRNA caps.

Authors:  Weizhi Liu; Rui Zhao; Craig McFarland; Jeffrey Kieft; Anna Niedzwiecka; Marzena Jankowska-Anyszka; Janusz Stepinski; Edward Darzynkiewicz; David N M Jones; Richard E Davis
Journal:  J Biol Chem       Date:  2009-08-26       Impact factor: 5.157

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