Literature DB >> 16404599

Oligonucleotide-directed gene repair in wheat using a transient plasmid gene repair assay system.

Chongmei Dong1, Peter Beetham, Kate Vincent, Peter Sharp.   

Abstract

Oligonucleotide-directed gene repair is a potential technique for agricultural trait modification in economically important crops. However, large variation in the repair frequencies among the scientific reports indicates that there are many factors influencing the repair process. We report here a transient assay system using GFP as a reporter for testing the efficiency of plasmid DNA repair in cultured wheat cells. This assay showed that osmotic medium supplemented with 2,4-D increased the oligo-targeting frequency, and that the repair of a point mutation was more efficient than repair of a single base deletion mutation in cultured scutellum cells of immature wheat embryos. This study provides the first evidence that oligonucleotide-directed mutagenesis is applicable to regenerable cultured wheat scutellum cells.

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Year:  2006        PMID: 16404599     DOI: 10.1007/s00299-005-0098-x

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  43 in total

1.  Targeted manipulation of maize genes in vivo using chimeric RNA/DNA oligonucleotides.

Authors:  T Zhu; D J Peterson; L Tagliani; G St Clair; C L Baszczynski; B Bowen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Gene therapy in plants.

Authors:  B Hohn; H Puchta
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

3.  DNA replication and transcription direct a DNA strand bias in the process of targeted gene repair in mammalian cells.

Authors:  Erin E Brachman; Eric B Kmiec
Journal:  J Cell Sci       Date:  2004-07-20       Impact factor: 5.285

4.  Transformation of yeast with synthetic oligonucleotides.

Authors:  R P Moerschell; S Tsunasawa; F Sherman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-01       Impact factor: 11.205

5.  Targeted gene repair directed by the chimeric RNA/DNA oligonucleotide in a mammalian cell-free extract.

Authors:  A Cole-Strauss; H Gamper; W K Holloman; M Muñoz; N Cheng; E B Kmiec
Journal:  Nucleic Acids Res       Date:  1999-03-01       Impact factor: 16.971

6.  Targeted nucleotide exchange in the alkaline phosphatase gene of HuH-7 cells mediated by a chimeric RNA/DNA oligonucleotide.

Authors:  B T Kren; A Cole-Strauss; E B Kmiec; C J Steer
Journal:  Hepatology       Date:  1997-06       Impact factor: 17.425

7.  A plausible mechanism for gene correction by chimeric oligonucleotides.

Authors:  H B Gamper; A Cole-Strauss; R Metz; H Parekh; R Kumar; E B Kmiec
Journal:  Biochemistry       Date:  2000-05-16       Impact factor: 3.162

8.  Chloroplast lysates support directed mutagenesis via modified DNA and chimeric RNA/DNA oligonucleotides.

Authors:  E B Kmiec; C Johnson; G D May
Journal:  Plant J       Date:  2001-08       Impact factor: 6.417

Review 9.  Oligonucleotide-directed mutagenesis and targeted gene correction: a mechanistic point of view.

Authors:  Olga Igoucheva; Vitali Alexeev; Kyonggeun Yoon
Journal:  Curr Mol Med       Date:  2004-08       Impact factor: 2.222

10.  Stable and inheritable changes in genotype and phenotype of albino melanocytes induced by an RNA-DNA oligonucleotide.

Authors:  V Alexeev; K Yoon
Journal:  Nat Biotechnol       Date:  1998-12       Impact factor: 54.908

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  17 in total

1.  Multiplexed Gene Editing and Protein Overexpression Using a Tobacco mosaic virus Viral Vector.

Authors:  Will B Cody; Herman B Scholthof; T Erik Mirkov
Journal:  Plant Physiol       Date:  2017-06-29       Impact factor: 8.340

Review 2.  Homology-based double-strand break-induced genome engineering in plants.

Authors:  Jeannette Steinert; Simon Schiml; Holger Puchta
Journal:  Plant Cell Rep       Date:  2016-04-15       Impact factor: 4.570

Review 3.  Progress of targeted genome modification approaches in higher plants.

Authors:  Teodoro Cardi; C Neal Stewart
Journal:  Plant Cell Rep       Date:  2016-03-29       Impact factor: 4.570

4.  Relaxed chromatin induced by histone deacetylase inhibitors improves the oligonucleotide-directed gene editing in plant cells.

Authors:  Hilda Tiricz; Bettina Nagy; Györgyi Ferenc; Katalin Török; István Nagy; Dénes Dudits; Ferhan Ayaydin
Journal:  J Plant Res       Date:  2017-08-23       Impact factor: 2.629

Review 5.  Editing the Genome Without Double-Stranded DNA Breaks.

Authors:  Alexis C Komor; Ahmed H Badran; David R Liu
Journal:  ACS Chem Biol       Date:  2017-10-09       Impact factor: 5.100

6.  NEATTILL: A simplified procedure for nucleic acid extraction from arrayed tissue for TILLING and other high-throughput reverse genetic applications.

Authors:  Yellamaraju Sreelakshmi; Soni Gupta; Reddaiah Bodanapu; Vineeta Singh Chauhan; Mickey Hanjabam; Sherinmol Thomas; Vijee Mohan; Sulabha Sharma; Rajeswari Srinivasan; Rameshwar Sharma
Journal:  Plant Methods       Date:  2010-01-26       Impact factor: 4.993

7.  Gene editing by co-transformation of TALEN and chimeric RNA/DNA oligonucleotides on the rice OsEPSPS gene and the inheritance of mutations.

Authors:  Mugui Wang; Yujun Liu; Cuicui Zhang; Jianping Liu; Xin Liu; Liangchao Wang; Wenyi Wang; Hao Chen; Chuchu Wei; Xiufen Ye; Xinyuan Li; Jumin Tu
Journal:  PLoS One       Date:  2015-04-09       Impact factor: 3.240

Review 8.  Insights into the regenerative property of plant cells and their receptivity to transgenesis: wheat as a research case study.

Authors:  Fabienne Delporte; Jean-Marie Jacquemin; Patrick Masson; Bernard Watillon
Journal:  Plant Signal Behav       Date:  2012-10-16

9.  Manipulation of cell cycle progression can counteract the apparent loss of correction frequency following oligonucleotide-directed gene repair.

Authors:  Julia U Engstrom; Eric B Kmiec
Journal:  BMC Mol Biol       Date:  2007-02-06       Impact factor: 2.946

Review 10.  Oligonucleotide-directed mutagenesis for precision gene editing.

Authors:  Noel J Sauer; Jerry Mozoruk; Ryan B Miller; Zachary J Warburg; Keith A Walker; Peter R Beetham; Christian R Schöpke; Greg F W Gocal
Journal:  Plant Biotechnol J       Date:  2015-10-27       Impact factor: 9.803

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