Literature DB >> 16403893

Shewanella hafniensis sp. nov. and Shewanella morhuae sp. nov., isolated from marine fish of the Baltic Sea.

Masataka Satomi1, Birte Fonnesbech Vogel, Lone Gram, Kasthuri Venkateswaran.   

Abstract

Two novel species belonging to the genus Shewanella are described on the basis of their phenotypic characteristics, phylogenetic analyses of 16S rRNA and gyrB gene sequences and levels of DNA-DNA hybridization. A total of 47 strains belonging to two novel Gram-negative, psychrotolerant, H2S-producing bacterial species were isolated from marine fish (cod and flounder) caught from the Baltic Sea off Denmark. The phenotypic characteristics of strains belonging to group 1 (14 strains) indicated that these represented a non-sucrose-assimilating variant of Shewanella baltica with a DNA G+C content of 47.0 mol%. Strains of group 2 (33 isolates) did not utilize the carbon substrates assimilated by S. baltica except gluconate, N-acetylglucosamine and malate. Their DNA G+C content was 44.0 mol%. Phylogenetic analysis of the 16S rRNA gene sequence data placed the two novel species within the genus Shewanella. Group 1 strains showed greatest sequence similarity to Shewanella putrefaciens ATCC 8071T (99.0 %) and with S. baltica NCTC 10375(T) (98.3 %). However, gyrB gene sequence analysis showed these isolates to share only 90.0 % sequence similarity with S. putrefaciens ATCC 8071T and 93.9 % with S. baltica NCTC 10375T. Similarly, DNA-DNA hybridization experiments revealed DNA relatedness levels of 38 % between the group 1 isolates and S. putrefaciens ATCC 8071T and 43 % with S. baltica NCTC 10375T. The group 2 strains shared less than 97 % 16S rRNA gene sequence similarities with recognized Shewanella species. Comparisons between the two novel species indicated 16S rRNA gene sequence similarity of approximately 98 %, gyrB gene sequence similarity of approximately 89 % and DNA-DNA reassociation values of 20-34 %. Based on the evidence presented, two novel species, Shewanella hafniensis sp. nov. (type strain P010T = ATCC BAA-1207T = NBRC 100975T) and Shewanella morhuae sp. nov. (type strain U1417T = ATCC BAA-1205T = NBRC 100978T), are described.

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Year:  2006        PMID: 16403893     DOI: 10.1099/ijs.0.63931-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

1.  Shewanella upenei sp. nov., a lipolytic bacterium isolated from bensasi goatfish Upeneus bensasi.

Authors:  Kyung-Kil Kim; Young-Ok Kim; Sooyeon Park; So-Jung Kang; Bo-Hye Nam; Doo Nam Kim; Tae-Kwang Oh; Jung-Hoon Yoon
Journal:  J Microbiol       Date:  2011-06-30       Impact factor: 3.422

2.  The Microbiota of Freshwater Fish and Freshwater Niches Contain Omega-3 Fatty Acid-Producing Shewanella Species.

Authors:  Frank E Dailey; Joseph E McGraw; Brittany J Jensen; Sydney S Bishop; James P Lokken; Kellen J Dorff; Michael P Ripley; James B Munro
Journal:  Appl Environ Microbiol       Date:  2015-10-23       Impact factor: 4.792

3.  Characterization of putative pathogenic Shewanella algae isolated from ballast water.

Authors:  Nik Nuraznida Nik Ibrahim; Nurathirah Mat Nasir; Fathul Karim Sahrani; Asmat Ahmad; Fareed Sairi
Journal:  Vet World       Date:  2021-03-19

4.  Potential for luxS related signalling in marine bacteria and production of autoinducer-2 in the genus Shewanella.

Authors:  Agnes Bodor; Bettina Elxnat; Verena Thiel; Stefan Schulz; Irene Wagner-Döbler
Journal:  BMC Microbiol       Date:  2008-01-23       Impact factor: 3.605

5.  Genome Analysis of Multidrug-Resistant Shewanella algae Isolated From Human Soft Tissue Sample.

Authors:  Yao-Ting Huang; Yu-Yu Tang; Jan-Fang Cheng; Zong-Yen Wu; Yan-Chiao Mao; Po-Yu Liu
Journal:  Front Pharmacol       Date:  2018-04-26       Impact factor: 5.810

6.  Genome Sequences of Shewanella baltica and Shewanella morhuae Strains Isolated from the Gastrointestinal Tract of Freshwater Fish.

Authors:  Daniel Castillo; Lone Gram; Frank E Dailey
Journal:  Genome Announc       Date:  2018-06-21
  6 in total

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