Literature DB >> 21717322

Shewanella upenei sp. nov., a lipolytic bacterium isolated from bensasi goatfish Upeneus bensasi.

Kyung-Kil Kim1, Young-Ok Kim, Sooyeon Park, So-Jung Kang, Bo-Hye Nam, Doo Nam Kim, Tae-Kwang Oh, Jung-Hoon Yoon.   

Abstract

A Gram-staining-negative, motile, non-spore-forming and rod-shaped bacterial strain, 20-23R(T), was isolated from intestine of bensasi goatfish, Upeneus bensasi, and its taxonomic position was investigated by using a polyphasic study. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain 20-23R(T) belonged to the genus Shewanella. Strain 20-23R(T) exhibited 16S rRNA gene sequence similarity values of 99.5, 99.2, and 97.5% to Shewanella algae ATCC 51192(T), Shewanella haliotis DW01(T), and Shewanella chilikensis JC5(T), respectively. Strain 20-23R(T) exhibited 93.1-96.0% 16S rRNA gene sequence similarity to the other Shewanella species. It also exhibited 98.3-98.4% gyrB sequence similarity to the type strains of S. algae and S. haliotis. Strain 20-23R(T) contained simultaneously both menaquinones and ubiquinones; the predominant menaquinone was MK-7 and the predominant ubiquinones were Q-8 and Q-7. The fatty acid profiles of strain 20-23R(T), S. algae KCTC 22552(T) and S. haliotis KCTC 12896(T) were similar; major components were iso-C(15:0), C(16:0), C(16:1) ω7c and/or iso-C(15:0) 2-OH and C(17:1) ω8c. The DNA G+C content of strain 20-23R(T) was 53.9 mol%. Differential phenotypic properties and genetic distinctiveness of strain 20-23R(T), together with the phylogenetic distinctiveness, revealed that this strain is distinguishable from recognized Shewanella species. On the basis of the data presented, strain 20-23R(T) represents a novel species of the genus Shewanella, for which the name Shewanella upenei sp. nov. is proposed. The type strain is 20-23R(T) (=KCTC 22806(T) =CCUG 58400(T)).

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Year:  2011        PMID: 21717322     DOI: 10.1007/s12275-011-0175-5

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  20 in total

1.  List of Bacterial Names with Standing in Nomenclature: a folder available on the Internet.

Authors:  J P Euzéby
Journal:  Int J Syst Bacteriol       Date:  1997-04

2.  Shewanella surugensis sp. nov., Shewanella kaireitica sp. nov. and Shewanella abyssi sp. nov., isolated from deep-sea sediments of Suruga Bay, Japan.

Authors:  Masayuki Miyazaki; Yuichi Nogi; Ron Usami; Koki Horikoshi
Journal:  Int J Syst Evol Microbiol       Date:  2006-07       Impact factor: 2.747

3.  Shewanella irciniae sp. nov., a novel member of the family Shewanellaceae, isolated from the marine sponge Ircinia dendroides in the Bay of Villefranche, Mediterranean Sea.

Authors:  On On Lee; Stanley C K Lau; Mandy M Y Tsoi; Xiancui Li; Ioulia Plakhotnikova; Sergey Dobretsov; Madeline C S Wu; Po-Keung Wong; Markus Weinbauer; Pei-Yuan Qian
Journal:  Int J Syst Evol Microbiol       Date:  2006-12       Impact factor: 2.747

4.  Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment.

Authors:  A Bruns; M Rohde; L Berthe-Corti
Journal:  Int J Syst Evol Microbiol       Date:  2001-11       Impact factor: 2.747

5.  Shewanella basaltis sp. nov., a marine bacterium isolated from black sand.

Authors:  Ho-Won Chang; Seong Woon Roh; Kyoung-Ho Kim; Young-Do Nam; Che Ok Jeon; Hee-Mock Oh; Jin-Woo Bae
Journal:  Int J Syst Evol Microbiol       Date:  2008-08       Impact factor: 2.747

6.  Shewanella pacifica sp. nov., a polyunsaturated fatty acid-producing bacterium isolated from sea water.

Authors:  Elena P Ivanova; Nataliya M Gorshkova; John P Bowman; Anatoli M Lysenko; Natalia V Zhukova; Alexander F Sergeev; Valery V Mikhailov; Dan V Nicolau
Journal:  Int J Syst Evol Microbiol       Date:  2004-07       Impact factor: 2.747

7.  Isolation and characterization of Shewanella alga from human clinical specimens and emendation of the description of S. alga Simidu et al., 1990, 335.

Authors:  H Nozue; T Hayashi; Y Hashimoto; T Ezaki; K Hamasaki; K Ohwada; Y Terawaki
Journal:  Int J Syst Bacteriol       Date:  1992-10

8.  Shewanella haliotis sp. nov., isolated from the gut microflora of abalone, Haliotis discus hannai.

Authors:  Duwoon Kim; Keun Sik Baik; Mi Sun Kim; Bok-Mi Jung; Tai-Sun Shin; Gyu-Hwa Chung; Moon Soo Rhee; Chi Nam Seong
Journal:  Int J Syst Evol Microbiol       Date:  2007-12       Impact factor: 2.747

9.  Microbulbifer salipaludis sp. nov., a moderate halophile isolated from a Korean salt marsh.

Authors:  Jung-Hoon Yoon; In-Gi Kim; Dong-Yeon Shin; Kook Hee Kang; Yong-Ha Park
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747

10.  Shewanella marisflavi sp. nov. and Shewanella aquimarina sp. nov., slightly halophilic organisms isolated from sea water of the Yellow Sea in Korea.

Authors:  Jung-Hoon Yoon; Soo-Hwan Yeo; In-Gi Kim; Tae-Kwang Oh
Journal:  Int J Syst Evol Microbiol       Date:  2004-11       Impact factor: 2.747

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  5 in total

1.  Multilocus Sequence Analysis, a Rapid and Accurate Tool for Taxonomic Classification, Evolutionary Relationship Determination, and Population Biology Studies of the Genus Shewanella.

Authors:  Yujie Fang; Yonglu Wang; Zongdong Liu; Hang Dai; Hongyan Cai; Zhenpeng Li; Zongjun Du; Xin Wang; Huaiqi Jing; Qiang Wei; Biao Kan; Duochun Wang
Journal:  Appl Environ Microbiol       Date:  2019-05-16       Impact factor: 4.792

2.  Reduction of alternative electron acceptors drives biofilm formation in Shewanella algae.

Authors:  Alberto J Martín-Rodríguez; José A Reyes-Darias; David Martín-Mora; José M González; Tino Krell; Ute Römling
Journal:  NPJ Biofilms Microbiomes       Date:  2021-01-27       Impact factor: 7.290

3.  Characterization of putative pathogenic Shewanella algae isolated from ballast water.

Authors:  Nik Nuraznida Nik Ibrahim; Nurathirah Mat Nasir; Fathul Karim Sahrani; Asmat Ahmad; Fareed Sairi
Journal:  Vet World       Date:  2021-03-19

4.  The influence of weight and gender on intestinal bacterial community of wild largemouth bronze gudgeon (Coreius guichenoti, 1874).

Authors:  Xuemei Li; Qingyun Yan; Einar Ringø; Xingbing Wu; Yongfeng He; Deguo Yang
Journal:  BMC Microbiol       Date:  2016-08-22       Impact factor: 3.605

5.  Rare Shewanella spp. associated with pulmonary and bloodstream infections of cancer patients, China: a case report.

Authors:  Furong Zhang; Yujie Fang; Feng Pang; Shengnan Liang; Xin Lu; Biao Kan; Jianguo Xu; Jinxing Zhao; Yinju Du; Duochun Wang
Journal:  BMC Infect Dis       Date:  2018-09-05       Impact factor: 3.090

  5 in total

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