Literature DB >> 16387868

Genetic analysis connects SLX5 and SLX8 to the SUMO pathway in Saccharomyces cerevisiae.

Zheng Wang1, Grace Marie Jones, Gregory Prelich.   

Abstract

MOT1 encodes an essential ATPase that functions as a general transcriptional regulator in vivo by modulating TATA-binding protein (TBP) DNA-binding activity. Although MOT1 was originally identified both biochemically and in several genetic screens as a transcriptional repressor, a combination of subsequent genetic, chromatin immunoprecipitation, and microarray analysis suggested that MOT1 might also have an additional role in vivo as a transcriptional activator. To better understand the role(s) of MOT1 in vivo, we selected for genomic suppressors of a mot1 temperature-sensitive mutation. This selection identified mutations in SPT15 (TBP) and BUR6, both of which are clearly linked with MOT1 at the functional level. The vast majority of the suppressor mutations, however, unexpectedly occurred in six genes that encode known components of the SUMO pathway and in two other genes with unknown functions, SLX5 and SLX8. Additional results presented here, including extensive synthetic lethality observed between slx5delta and slx8delta and SUMO pathway mutations, suggest that SLX5 and SLX8 are new components or regulators of the SUMO pathway and that SUMO modification might have a general role in transcriptional regulation as part of the TBP regulatory network.

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Year:  2005        PMID: 16387868      PMCID: PMC1456262          DOI: 10.1534/genetics.105.052811

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  54 in total

Review 1.  Modification with SUMO. A role in transcriptional regulation.

Authors:  Alexis Verger; José Perdomo; Merlin Crossley
Journal:  EMBO Rep       Date:  2003-02       Impact factor: 8.807

2.  SUMO-1 modification represses Sp3 transcriptional activation and modulates its subnuclear localization.

Authors:  Sarah Ross; Jennifer L Best; Leonard I Zon; Grace Gill
Journal:  Mol Cell       Date:  2002-10       Impact factor: 17.970

3.  Mot1 associates with transcriptionally active promoters and inhibits association of NC2 in Saccharomyces cerevisiae.

Authors:  Joseph V Geisberg; Zarmik Moqtaderi; Laurent Kuras; Kevin Struhl
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

4.  Mot1 activates and represses transcription by direct, ATPase-dependent mechanisms.

Authors:  Arindam Dasgupta; Russell P Darst; Karla J Martin; Cynthia A Afshari; David T Auble
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

5.  A new protease required for cell-cycle progression in yeast.

Authors:  S J Li; M Hochstrasser
Journal:  Nature       Date:  1999-03-18       Impact factor: 49.962

6.  Crystal structure of negative cofactor 2 recognizing the TBP-DNA transcription complex.

Authors:  K Kamada; F Shu; H Chen; S Malik; G Stelzer; R G Roeder; M Meisterernst; S K Burley
Journal:  Cell       Date:  2001-07-13       Impact factor: 41.582

7.  Yeast Ull1/Siz1 is a novel SUMO1/Smt3 ligase for septin components and functions as an adaptor between conjugating enzyme and substrates.

Authors:  Y Takahashi; T Kahyo; A Toh-E; H Yasuda; Y Kikuchi
Journal:  J Biol Chem       Date:  2001-09-27       Impact factor: 5.157

8.  Genes involved in sister chromatid separation and segregation in the budding yeast Saccharomyces cerevisiae.

Authors:  S Biggins; N Bhalla; A Chang; D L Smith; A W Murray
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

9.  Mot1 regulates the DNA binding activity of free TATA-binding protein in an ATP-dependent manner.

Authors:  Russell P Darst; Arindam Dasgupta; Chunming Zhu; Jer-Yuan Hsu; Amy Vroom; Tamara Muldrow; David T Auble
Journal:  J Biol Chem       Date:  2003-02-04       Impact factor: 5.157

10.  Mot1p is essential for TBP recruitment to selected promoters during in vivo gene activation.

Authors:  Jean-Christophe Andrau; Chris J C Van Oevelen; Hetty A A M Van Teeffelen; P Anthony Weil; Frank C P Holstege; H Th Marc Timmers
Journal:  EMBO J       Date:  2002-10-01       Impact factor: 11.598

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  45 in total

Review 1.  The budding yeast nucleus.

Authors:  Angela Taddei; Heiko Schober; Susan M Gasser
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-16       Impact factor: 10.005

2.  Genetic analysis implicates the Set3/Hos2 histone deacetylase in the deposition and remodeling of nucleosomes containing H2A.Z.

Authors:  Mingda Hang; M Mitchell Smith
Journal:  Genetics       Date:  2011-02-01       Impact factor: 4.562

3.  Nucleoporins prevent DNA damage accumulation by modulating Ulp1-dependent sumoylation processes.

Authors:  Benoit Palancade; Xianpeng Liu; Maria Garcia-Rubio; Andrès Aguilera; Xiaolan Zhao; Valérie Doye
Journal:  Mol Biol Cell       Date:  2007-05-30       Impact factor: 4.138

4.  The Slx5-Slx8 complex affects sumoylation of DNA repair proteins and negatively regulates recombination.

Authors:  Rebecca C Burgess; Sadia Rahman; Michael Lisby; Rodney Rothstein; Xiaolan Zhao
Journal:  Mol Cell Biol       Date:  2007-06-25       Impact factor: 4.272

Review 5.  An additional role for SUMO in ubiquitin-mediated proteolysis.

Authors:  Marie-Claude Geoffroy; Ronald T Hay
Journal:  Nat Rev Mol Cell Biol       Date:  2009-05-28       Impact factor: 94.444

6.  Degradation of the Saccharomyces cerevisiae mating-type regulator alpha1: genetic dissection of cis-determinants and trans-acting pathways.

Authors:  Christina E Nixon; Alexander J Wilcox; Jeffrey D Laney
Journal:  Genetics       Date:  2010-03-29       Impact factor: 4.562

7.  Activation of the Slx5-Slx8 ubiquitin ligase by poly-small ubiquitin-like modifier conjugates.

Authors:  Janet R Mullen; Steven J Brill
Journal:  J Biol Chem       Date:  2008-05-22       Impact factor: 5.157

8.  Conserved function of RNF4 family proteins in eukaryotes: targeting a ubiquitin ligase to SUMOylated proteins.

Authors:  Huaiyu Sun; Joel D Leverson; Tony Hunter
Journal:  EMBO J       Date:  2007-08-30       Impact factor: 11.598

9.  SUMO-targeted ubiquitin ligases in genome stability.

Authors:  John Prudden; Stephanie Pebernard; Grazia Raffa; Daniela A Slavin; J Jefferson P Perry; John A Tainer; Clare H McGowan; Michael N Boddy
Journal:  EMBO J       Date:  2007-08-30       Impact factor: 11.598

Review 10.  Genome stability roles of SUMO-targeted ubiquitin ligases.

Authors:  J Heideker; J J P Perry; M N Boddy
Journal:  DNA Repair (Amst)       Date:  2009-02-23
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