Literature DB >> 16377560

Control of transcription through intragenic patterns of nucleosome composition.

Jason D Lieb1, Neil D Clarke.   

Abstract

Several recent papers show that differences in histone modification and the use of histone variants at the 5' and 3' ends of genes influence the location and kinetics of transcriptional initiation. The ultimate target of most epigenetic mechanisms may be the regulation of nucleosome occupancy, which in turn controls access to DNA at specific genomic locations.

Mesh:

Substances:

Year:  2005        PMID: 16377560     DOI: 10.1016/j.cell.2005.12.010

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  37 in total

Review 1.  Chromatin-mediated epigenetic regulation in the malaria parasite Plasmodium falciparum.

Authors:  Liwang Cui; Jun Miao
Journal:  Eukaryot Cell       Date:  2010-05-07

2.  Differential nuclease sensitivity profiling of chromatin reveals biochemical footprints coupled to gene expression and functional DNA elements in maize.

Authors:  Daniel L Vera; Thelma F Madzima; Jonathan D Labonne; Mohammad P Alam; Gregg G Hoffman; S B Girimurugan; Jinfeng Zhang; Karen M McGinnis; Jonathan H Dennis; Hank W Bass
Journal:  Plant Cell       Date:  2014-10-31       Impact factor: 11.277

Review 3.  Colorectal cancer: a model for epigenetic tumorigenesis.

Authors:  J J L Wong; N J Hawkins; R L Ward
Journal:  Gut       Date:  2006-07-13       Impact factor: 23.059

4.  Epigenetic memory loss in aging oligodendrocytes in the corpus callosum.

Authors:  Siming Shen; Aixiao Liu; Jiadong Li; Candy Wolubah; Patrizia Casaccia-Bonnefil
Journal:  Neurobiol Aging       Date:  2006-12-19       Impact factor: 4.673

5.  RSC exploits histone acetylation to abrogate the nucleosomal block to RNA polymerase II elongation.

Authors:  Michael Carey; Bing Li; Jerry L Workman
Journal:  Mol Cell       Date:  2006-11-03       Impact factor: 17.970

6.  Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection.

Authors:  Xiao Liu; Cheol-Koo Lee; Joshua A Granek; Neil D Clarke; Jason D Lieb
Journal:  Genome Res       Date:  2006-10-19       Impact factor: 9.043

7.  The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation.

Authors:  Thomas Gligoris; George Thireos; Dimitris Tzamarias
Journal:  Mol Cell Biol       Date:  2007-03-26       Impact factor: 4.272

8.  Rtf1 is a multifunctional component of the Paf1 complex that regulates gene expression by directing cotranscriptional histone modification.

Authors:  Marcie H Warner; Kelli L Roinick; Karen M Arndt
Journal:  Mol Cell Biol       Date:  2007-06-18       Impact factor: 4.272

9.  Histone acetylation at the human beta-globin locus changes with developmental age.

Authors:  Wenxuan Yin; Gráinne Barkess; Xiangdong Fang; Ping Xiang; Hua Cao; George Stamatoyannopoulos; Qiliang Li
Journal:  Blood       Date:  2007-09-19       Impact factor: 22.113

10.  Role of nucleosomal occupancy in the epigenetic silencing of the MLH1 CpG island.

Authors:  Joy C Lin; Shinwu Jeong; Gangning Liang; Daiya Takai; Merhnaz Fatemi; Yvonne C Tsai; Gerda Egger; Einav Nili Gal-Yam; Peter A Jones
Journal:  Cancer Cell       Date:  2007-11       Impact factor: 31.743

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.