Literature DB >> 16369765

Evidence for novel loci for late-onset Parkinson's disease in a genetic isolate from the Netherlands.

Aida M Bertoli-Avella1, Marieke C J Dekker, Yurii S Aulchenko, Jeanine J Houwing-Duistermaat, Erik Simons, Leon Testers, Luba M Pardo, Tessa A M Rademaker, Pieter J L M Snijders, John C van Swieten, Vincenzo Bonifati, Peter Heutink, Cornelia M van Duijn, Ben A Oostra.   

Abstract

We studied patients with idiopathic Parkinson's disease (PD) from an isolated population in the Netherlands aiming to map gene(s) involved in PD susceptibility. A total of 109 parkinsonism patients were independently ascertained, of whom 62 presented late-onset, idiopathic PD. Genealogical research showed that 45 index cases with idiopathic PD were linked to a common ancestor, indicating familiar clustering among the patients. This strong familial clustering was highly significant (P = 0.005) when compared to random controls from the same population. We performed a genome wide scan using 382 polymorphic markers in 44 distantly related PD patients plus 112 unaffected first-degree relatives and spouses. Our genome wide association analysis (DISLAMB) revealed evidence of association at a nominal P-value < 0.01 for markers D2S2333, D4S405, D9S158, D13S153. Other regions on chromosomes 3p, 4q, 14q, 17p and 17q were found at a significance level of P < 0.05. In a follow-up study, we investigated all the positive regions using a denser marker set and a larger sample (total of 630 individuals including all late-onset PD patients). The strongest evidence for association remained for the 9q and 14q region. A significant association was found for marker D9S1838 (OR = 2.0, 95% CI 1.1-3.5, P = 0.014) and D14S65 (OR = 3.2, 95% CI 1.7-6.1, P < 0.001). Moreover, a common haplotype with excess of sharing among late-onset PD cases was observed on both regions. Our results suggest the existence of two loci influencing PD susceptibility on chromosome 9q and 14q.

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Year:  2005        PMID: 16369765     DOI: 10.1007/s00439-005-0108-7

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  32 in total

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Authors:  S K Service; D W Lang; N B Freimer; L A Sandkuijl
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2.  Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data.

Authors:  Na Li; Matthew Stephens
Journal:  Genetics       Date:  2003-12       Impact factor: 4.562

3.  A method for pooling alleles from different genotyping experiments.

Authors:  Y S Aulchenko; A M Bertoli-Avella; C M van Duijn
Journal:  Ann Hum Genet       Date:  2005-03       Impact factor: 1.670

4.  Genome-wide scan linkage analysis for Parkinson's disease: the European genetic study of Parkinson's disease.

Authors:  M Martinez; A Brice; J R Vaughan; A Zimprich; M M B Breteler; G Meco; A Filla; M J Farrer; C Bétard; J Hardy; G De Michele; V Bonifati; B Oostra; T Gasser; N W Wood; A Dürr
Journal:  J Med Genet       Date:  2004-12       Impact factor: 6.318

5.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

6.  Complete genomic screen in Parkinson disease: evidence for multiple genes.

Authors:  W K Scott; M A Nance; R L Watts; J P Hubble; W C Koller; K Lyons; R Pahwa; M B Stern; A Colcher; B C Hiner; J Jankovic; W G Ondo; F H Allen; C G Goetz; G W Small; D Masterman; F Mastaglia; N G Laing; J M Stajich; B Slotterbeck; M W Booze; R C Ribble; E Rampersaud; S G West; R A Gibson; L T Middleton; A D Roses; J L Haines; B L Scott; J M Vance; M A Pericak-Vance
Journal:  JAMA       Date:  2001-11-14       Impact factor: 56.272

7.  Mutations in the parkin gene cause autosomal recessive juvenile parkinsonism.

Authors:  T Kitada; S Asakawa; N Hattori; H Matsumine; Y Yamamura; S Minoshima; M Yokochi; Y Mizuno; N Shimizu
Journal:  Nature       Date:  1998-04-09       Impact factor: 49.962

8.  A powerful likelihood method for the analysis of linkage disequilibrium between trait loci and one or more polymorphic marker loci.

Authors:  J D Terwilliger
Journal:  Am J Hum Genet       Date:  1995-03       Impact factor: 11.025

9.  Genome-wide scan for Parkinson's disease: the GenePD Study.

Authors:  A L DeStefano; L I Golbe; M H Mark; A M Lazzarini; N E Maher; M Saint-Hilaire; R G Feldman; M Guttman; R L Watts; O Suchowersky; A L Lafontaine; N Labelle; M F Lew; C H Waters; J H Growdon; C Singer; L J Currie; G F Wooten; P Vieregge; P P Pramstaller; C Klein; J P Hubble; M Stacy; E Montgomery; M E MacDonald; J F Gusella; R H Myers
Journal:  Neurology       Date:  2001-09-25       Impact factor: 9.910

10.  Mutations in the DJ-1 gene associated with autosomal recessive early-onset parkinsonism.

Authors:  Vincenzo Bonifati; Patrizia Rizzu; Marijke J van Baren; Onno Schaap; Guido J Breedveld; Elmar Krieger; Marieke C J Dekker; Ferdinando Squitieri; Pablo Ibanez; Marijke Joosse; Jeroen W van Dongen; Nicola Vanacore; John C van Swieten; Alexis Brice; Giuseppe Meco; Cornelia M van Duijn; Ben A Oostra; Peter Heutink
Journal:  Science       Date:  2002-11-21       Impact factor: 47.728

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  3 in total

1.  Genome-wide linkage screen in familial Parkinson disease identifies loci on chromosomes 3 and 18.

Authors:  Xiaoyi Gao; Eden R Martin; Yutao Liu; Gregory Mayhew; Jeffery M Vance; William K Scott
Journal:  Am J Hum Genet       Date:  2009-03-26       Impact factor: 11.025

2.  Regulation of striatal dopamine responsiveness by Notch/RBP-J signaling.

Authors:  M Toritsuka; S Kimoto; K Muraki; M Kitagawa; T Kishimoto; A Sawa; K Tanigaki
Journal:  Transl Psychiatry       Date:  2017-03-07       Impact factor: 6.222

3.  Meta analysis of whole-genome linkage scans with data uncertainty: an application to Parkinson's disease.

Authors:  Albert Rosenberger; Manu Sharma; Bertram Müller-Myhsok; Thomas Gasser; Heike Bickeböller
Journal:  BMC Genet       Date:  2007-07-02       Impact factor: 2.797

  3 in total

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