Literature DB >> 16365429

Uracil DNA glycosylase disruption blocks Ig gene conversion and induces transition mutations.

Huseyin Saribasak1, Nesibe Nur Saribasak, Fatih M Ipek, Joachim W Ellwart, Hiroshi Arakawa, Jean-Marie Buerstedde.   

Abstract

Ig gene conversion is most likely initiated by activation-induced cytidine deaminase-mediated cytosine deamination. If the resulting uracils need to be further processed by uracil DNA glycosylase (UNG), UNG inactivation should block gene conversion and induce transition mutations. In this study, we report that this is indeed the phenotype in the B cell line DT40. Ig gene conversion is almost completely extinguished in the UNG-deficient mutant and large numbers of transition mutations at C/G bases accumulate within the rearranged Ig L chain gene (IgL). The mutation rate of UNG-deficient cells is about seven times higher than that of pseudo V gene-deleted (psiV-) cells in which mutations arise presumably after uracil excision. In addition, UNG-deficient cells show relatively more mutations upstream and downstream of the VJ segment. This suggests that hypermutating B cells process activation-induced cytidine deaminase-induced uracils with approximately one-seventh of uracils giving rise to mutations depending on their position.

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Year:  2006        PMID: 16365429     DOI: 10.4049/jimmunol.176.1.365

Source DB:  PubMed          Journal:  J Immunol        ISSN: 0022-1767            Impact factor:   5.422


  38 in total

1.  Local sequence targeting in the AID/APOBEC family differentially impacts retroviral restriction and antibody diversification.

Authors:  Rahul M Kohli; Robert W Maul; Amy F Guminski; Rhonda L McClure; Kiran S Gajula; Huseyin Saribasak; Moira A McMahon; Robert F Siliciano; Patricia J Gearhart; James T Stivers
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

Review 2.  Does DNA repair occur during somatic hypermutation?

Authors:  Huseyin Saribasak; Patricia J Gearhart
Journal:  Semin Immunol       Date:  2012-06-22       Impact factor: 11.130

3.  Mechanism of somatic hypermutation at the WA motif by human DNA polymerase η.

Authors:  Ye Zhao; Mark T Gregory; Christian Biertümpfel; Yue-Jin Hua; Fumio Hanaoka; Wei Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-29       Impact factor: 11.205

4.  Uracil residues dependent on the deaminase AID in immunoglobulin gene variable and switch regions.

Authors:  Robert W Maul; Huseyin Saribasak; Stella A Martomo; Rhonda L McClure; William Yang; Alexandra Vaisman; Hillary S Gramlich; David G Schatz; Roger Woodgate; David M Wilson; Patricia J Gearhart
Journal:  Nat Immunol       Date:  2010-12-12       Impact factor: 25.606

5.  Checkpoint kinase 2 is required for efficient immunoglobulin diversification.

Authors:  Kathrin Davari; Samantha Frankenberger; Angelika Schmidt; Nils-Sebastian Tomi; Berit Jungnickel
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

6.  The 9-1-1 DNA clamp is required for immunoglobulin gene conversion.

Authors:  Alihossein Saberi; Makoto Nakahara; Julian E Sale; Koji Kikuchi; Hiroshi Arakawa; Jean-Marie Buerstedde; Kenichi Yamamoto; Shunichi Takeda; Eiichiro Sonoda
Journal:  Mol Cell Biol       Date:  2008-07-28       Impact factor: 4.272

7.  C-terminal region of activation-induced cytidine deaminase (AID) is required for efficient class switch recombination and gene conversion.

Authors:  Somayeh Sabouri; Maki Kobayashi; Nasim A Begum; Jianliang Xu; Kouji Hirota; Tasuku Honjo
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-27       Impact factor: 11.205

8.  Brca1 in immunoglobulin gene conversion and somatic hypermutation.

Authors:  Simonne Longerich; Brian J Orelli; Richard W Martin; Douglas K Bishop; Ursula Storb
Journal:  DNA Repair (Amst)       Date:  2007-11-26

9.  RAD51 paralogs promote homology-directed repair at diversifying immunoglobulin V regions.

Authors:  Ellen C Ordinario; Munehisa Yabuki; Priya Handa; W Jason Cummings; Nancy Maizels
Journal:  BMC Mol Biol       Date:  2009-10-28       Impact factor: 2.946

10.  Altering the spectrum of immunoglobulin V gene somatic hypermutation by modifying the active site of AID.

Authors:  Meng Wang; Cristina Rada; Michael S Neuberger
Journal:  J Exp Med       Date:  2010-01-04       Impact factor: 14.307

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