Literature DB >> 16359854

Transcriptional regulators à la carte: engineering new effector specificities in bacterial regulatory proteins.

Teca Calcagno Galvão1, Víctor de Lorenzo.   

Abstract

For many regulators of bacterial biodegradation pathways, small molecule/effector binding is the signal for triggering transcriptional activation. Thus, regulation results from a cross-talk between chemicals sensed by transcriptional factors and operon expression status. These features can be utilised in the construction of biosensors for a wide range of target compounds as, in principle, any regulatory protein whose activity is modulated by binding to a small molecule can have its effector/inducer profile artificially altered. The cognate specificities of a number of regulatory proteins have been modified as an astute approach to developing, among others, bacterial biosensors for environmentally relevant compounds.

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Year:  2005        PMID: 16359854     DOI: 10.1016/j.copbio.2005.12.002

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  34 in total

Review 1.  Where microbiology meets microengineering: design and applications of reporter bacteria.

Authors:  Jan Roelof van der Meer; Shimshon Belkin
Journal:  Nat Rev Microbiol       Date:  2010-07       Impact factor: 60.633

Review 2.  Exploiting plug-and-play synthetic biology for drug discovery and production in microorganisms.

Authors:  Marnix H Medema; Rainer Breitling; Roel Bovenberg; Eriko Takano
Journal:  Nat Rev Microbiol       Date:  2010-12-29       Impact factor: 60.633

3.  A gene cluster involved in degradation of substituted salicylates via ortho cleavage in Pseudomonas sp. strain MT1 encodes enzymes specifically adapted for transformation of 4-methylcatechol and 3-methylmuconate.

Authors:  Beatriz Cámara; Piotr Bielecki; Filip Kaminski; Vitor Martins dos Santos; Iris Plumeier; Patricia Nikodem; Dietmar H Pieper
Journal:  J Bacteriol       Date:  2006-12-15       Impact factor: 3.490

Review 4.  Tailor-made transcriptional biosensors for optimizing microbial cell factories.

Authors:  Brecht De Paepe; Gert Peters; Pieter Coussement; Jo Maertens; Marjan De Mey
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-11       Impact factor: 3.346

5.  Directed Evolution of Transcription Factor-Based Biosensors for Altered Effector Specificity.

Authors:  Leopoldo Ferreira Marques Machado; Neil Dixon
Journal:  Methods Mol Biol       Date:  2022

6.  The chbG gene of the chitobiose (chb) operon of Escherichia coli encodes a chitooligosaccharide deacetylase.

Authors:  Subhash Chandra Verma; Subramony Mahadevan
Journal:  J Bacteriol       Date:  2012-07-13       Impact factor: 3.490

7.  Intracellular directed evolution of proteins from combinatorial libraries based on conditional phage replication.

Authors:  Andreas K Brödel; Alfonso Jaramillo; Mark Isalan
Journal:  Nat Protoc       Date:  2017-08-10       Impact factor: 13.491

8.  Amplification of small molecule-inducible gene expression via tuning of intracellular receptor densities.

Authors:  Baojun Wang; Mauricio Barahona; Martin Buck
Journal:  Nucleic Acids Res       Date:  2015-02-18       Impact factor: 16.971

9.  A high-throughput approach to identify genomic variants of bacterial metabolite producers at the single-cell level.

Authors:  Stephan Binder; Georg Schendzielorz; Norma Stäbler; Karin Krumbach; Kristina Hoffmann; Michael Bott; Lothar Eggeling
Journal:  Genome Biol       Date:  2012-05-28       Impact factor: 13.583

10.  A GFP-lacZ bicistronic reporter system for promoter analysis in environmental gram-negative bacteria.

Authors:  Rafael Silva-Rocha; Victor de Lorenzo
Journal:  PLoS One       Date:  2012-04-06       Impact factor: 3.240

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