Literature DB >> 16357860

Modelling strategies for the industrial exploitation of lactic acid bacteria.

Bas Teusink1, Eddy J Smid.   

Abstract

Lactic acid bacteria (LAB) have a long tradition of use in the food industry, and the number and diversity of their applications has increased considerably over the years. Traditionally, process optimization for these applications involved both strain selection and trial and error. More recently, metabolic engineering has emerged as a discipline that focuses on the rational improvement of industrially useful strains. In the post-genomic era, metabolic engineering increasingly benefits from systems biology, an approach that combines mathematical modelling techniques with functional-genomics data to build models for biological interpretation and--ultimately--prediction. In this review, the industrial applications of LAB are mapped onto available global, genome-scale metabolic modelling techniques to evaluate the extent to which functional genomics and systems biology can live up to their industrial promise.

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Year:  2006        PMID: 16357860     DOI: 10.1038/nrmicro1319

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  37 in total

1.  Evolution of D-lactate dehydrogenase activity from glycerol dehydrogenase and its utility for D-lactate production from lignocellulose.

Authors:  Qingzhao Wang; Lonnie O Ingram; K T Shanmugam
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

2.  A critical view of metabolic network adaptations.

Authors:  Balázs Papp; Bas Teusink; Richard A Notebaart
Journal:  HFSP J       Date:  2008-12-03

Review 3.  Unraveling microbial interactions in food fermentations: from classical to genomics approaches.

Authors:  Sander Sieuwerts; Frank A M de Bok; Jeroen Hugenholtz; Johan E T van Hylckama Vlieg
Journal:  Appl Environ Microbiol       Date:  2008-06-20       Impact factor: 4.792

4.  CRISPR/Cas9-Assisted Seamless Genome Editing in Lactobacillus plantarum and Its Application in N-Acetylglucosamine Production.

Authors:  Ding Zhou; Zhennan Jiang; Qingxiao Pang; Yuan Zhu; Qian Wang; Qingsheng Qi
Journal:  Appl Environ Microbiol       Date:  2019-10-16       Impact factor: 4.792

5.  Identification of prebiotic fructooligosaccharide metabolism in Lactobacillus plantarum WCFS1 through microarrays.

Authors:  Delphine M A Saulnier; Douwe Molenaar; Willem M de Vos; Glenn R Gibson; Sofia Kolida
Journal:  Appl Environ Microbiol       Date:  2007-01-19       Impact factor: 4.792

6.  Genome scale reconstruction of a Salmonella metabolic model: comparison of similarity and differences with a commensal Escherichia coli strain.

Authors:  Manal AbuOun; Patrick F Suthers; Gareth I Jones; Ben R Carter; Mark P Saunders; Costas D Maranas; Martin J Woodward; Muna F Anjum
Journal:  J Biol Chem       Date:  2009-08-18       Impact factor: 5.157

Review 7.  Anti-infective activities of lactobacillus strains in the human intestinal microbiota: from probiotics to gastrointestinal anti-infectious biotherapeutic agents.

Authors:  Vanessa Liévin-Le Moal; Alain L Servin
Journal:  Clin Microbiol Rev       Date:  2014-04       Impact factor: 26.132

Review 8.  Metabolic shifts: a fitness perspective for microbial cell factories.

Authors:  Anisha Goel; Meike Tessa Wortel; Douwe Molenaar; Bas Teusink
Journal:  Biotechnol Lett       Date:  2012-08-31       Impact factor: 2.461

9.  Evaluation and characterization of bacterial metabolic dynamics with a novel profiling technique, real-time metabolotyping.

Authors:  Shinji Fukuda; Yumiko Nakanishi; Eisuke Chikayama; Hiroshi Ohno; Tsuneo Hino; Jun Kikuchi
Journal:  PLoS One       Date:  2009-03-16       Impact factor: 3.240

10.  Positive selection on D-lactate dehydrogenases of Lactobacillus delbrueckii subspecies bulgaricus.

Authors:  Jifeng Zhang; Guangyu Gong; Xiao Wang; Hao Zhang; Weidong Tian
Journal:  IET Syst Biol       Date:  2015-08       Impact factor: 1.615

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