Literature DB >> 16351127

Oxygen- and temperature-dependent kinetic isotope effects in choline oxidase: correlating reversible hydride transfer with environmentally enhanced tunneling.

Fan Fan1, Giovanni Gadda.   

Abstract

Choline oxidase catalyzes the flavin-linked oxidation of choline to glycine betaine, with betaine aldehyde as intermediate and oxygen as electron acceptor. Here, the effects of oxygen concentration and temperature on the kinetic isotope effects with deuterated choline have been investigated. The D(kcat/Km) and Dkcat values with 1,2-[(2)H4]-choline were pH-independent at saturating oxygen concentrations, whereas they decreased at high pH to limiting values that depended on oxygen concentration at < or = 0.97 mM oxygen. The kcat/Km and kcat pH profiles had similar patterns reaching plateaus at high pH. Both the limiting kcat/Km at high pH and the pKa values were perturbed to lower values with choline and < or = 0.25 mM oxygen. These data suggest that oxygen availability modulates whether the reduced enzyme-betaine aldehyde complex partitions forward to catalysis rather then reverting to the oxidized enzyme-choline alkoxide species. At saturating oxygen concentrations, the D(kcat/Km) was 10.6 +/- 0.6 and temperature independent, and the isotope effect on the preexponential factors (A(H)'/A(D)') was 14 +/- 3, ruling out a classical over-the-barrier behavior for hydride transfer. Similar enthalpies of activation (deltaH(double dagger)) with values of 18 +/- 2 and 18 +/- 5 kJ mol(-1) were determined with choline and 1,2-[(2)H4]-choline. These data suggest that the hydride transfer reaction in which choline is oxidized by choline oxidase occurs quantum mechanically within a preorganized active site, with the reactive configuration for hydride tunneling being minimally affected by environmental vibrations of the reaction coordinate other than those affecting the distance between the donor and acceptor of the hydride.

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Year:  2005        PMID: 16351127     DOI: 10.1021/ja0560377

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  12 in total

1.  Evidence that a 'dynamic knockout' in Escherichia coli dihydrofolate reductase does not affect the chemical step of catalysis.

Authors:  E Joel Loveridge; Enas M Behiry; Jiannan Guo; Rudolf K Allemann
Journal:  Nat Chem       Date:  2012-03-11       Impact factor: 24.427

Review 2.  Multidimensional tunneling, recrossing, and the transmission coefficient for enzymatic reactions.

Authors:  Jingzhi Pu; Jiali Gao; Donald G Truhlar
Journal:  Chem Rev       Date:  2006-08       Impact factor: 60.622

3.  Contribution of flavin covalent linkage with histidine 99 to the reaction catalyzed by choline oxidase.

Authors:  Osbourne Quaye; Sharonda Cowins; Giovanni Gadda
Journal:  J Biol Chem       Date:  2009-04-27       Impact factor: 5.157

4.  Preserved hydride transfer mechanism in evolutionarily divergent thymidylate synthases.

Authors:  Thelma Abeysinghe; Baoyu Hong; Zhen Wang; Amnon Kohen
Journal:  Curr Top Biochem Res       Date:  2016

5.  Update 1 of: Tunneling and dynamics in enzymatic hydride transfer.

Authors:  Zachary D Nagel; Judith P Klinman
Journal:  Chem Rev       Date:  2010-12-08       Impact factor: 60.622

6.  Effects of the donor-acceptor distance and dynamics on hydride tunneling in the dihydrofolate reductase catalyzed reaction.

Authors:  Vanja Stojković; Laura L Perissinotti; Daniel Willmer; Stephen J Benkovic; Amnon Kohen
Journal:  J Am Chem Soc       Date:  2012-01-17       Impact factor: 15.419

7.  A remote mutation affects the hydride transfer by disrupting concerted protein motions in thymidylate synthase.

Authors:  Zhen Wang; Thelma Abeysinghe; Janet S Finer-Moore; Robert M Stroud; Amnon Kohen
Journal:  J Am Chem Soc       Date:  2012-10-15       Impact factor: 15.419

8.  Mg2+ binds to the surface of thymidylate synthase and affects hydride transfer at the interior active site.

Authors:  Zhen Wang; Paul J Sapienza; Thelma Abeysinghe; Calvin Luzum; Andrew L Lee; Janet S Finer-Moore; Robert M Stroud; Amnon Kohen
Journal:  J Am Chem Soc       Date:  2013-05-10       Impact factor: 15.419

Review 9.  Protein motions and the activation of the CH bond catalyzed by dihydrofolate reductase.

Authors:  Kevin Francis; Amnon Kohen
Journal:  Curr Opin Chem Biol       Date:  2014-04-16       Impact factor: 8.822

10.  Hydrogen donor-acceptor fluctuations from kinetic isotope effects: a phenomenological model.

Authors:  Daniel Roston; Christopher M Cheatum; Amnon Kohen
Journal:  Biochemistry       Date:  2012-08-15       Impact factor: 3.162

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